Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Limch1Q3UH68 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Limch1Q3UH68 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Limch1Q3UH68 Olfr582-201ENSMUST00000098212 960 ntBASIC15.26■□□□□ 0.03
Limch1Q3UH68 Gm38355-201ENSMUST00000192514 1570 ntBASIC15.26■□□□□ 0.03
Limch1Q3UH68 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Limch1Q3UH68 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Limch1Q3UH68 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Limch1Q3UH68 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Limch1Q3UH68 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Limch1Q3UH68 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Limch1Q3UH68 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Limch1Q3UH68 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Limch1Q3UH68 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Limch1Q3UH68 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC15.26■□□□□ 0.03
Limch1Q3UH68 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Limch1Q3UH68 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Limch1Q3UH68 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Limch1Q3UH68 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Limch1Q3UH68 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Limch1Q3UH68 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Limch1Q3UH68 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Limch1Q3UH68 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC15.25■□□□□ 0.03
Limch1Q3UH68 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.25■□□□□ 0.03
Limch1Q3UH68 Gm6152-201ENSMUST00000151704 340 ntBASIC15.25■□□□□ 0.03
Limch1Q3UH68 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Limch1Q3UH68 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Limch1Q3UH68 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.25■□□□□ 0.03
Limch1Q3UH68 Gm43179-201ENSMUST00000198797 275 ntBASIC15.25■□□□□ 0.03
Limch1Q3UH68 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC15.25■□□□□ 0.03
Limch1Q3UH68 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Limch1Q3UH68 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.25■□□□□ 0.03
Limch1Q3UH68 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC15.25■□□□□ 0.03
Limch1Q3UH68 AC154171.1-201ENSMUST00000224610 643 ntBASIC15.25■□□□□ 0.03
Limch1Q3UH68 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Limch1Q3UH68 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.25■□□□□ 0.03
Limch1Q3UH68 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Limch1Q3UH68 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Limch1Q3UH68 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Limch1Q3UH68 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Limch1Q3UH68 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Limch1Q3UH68 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Limch1Q3UH68 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Limch1Q3UH68 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Limch1Q3UH68 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Limch1Q3UH68 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Limch1Q3UH68 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Limch1Q3UH68 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.25■□□□□ 0.03
Limch1Q3UH68 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Limch1Q3UH68 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Limch1Q3UH68 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Limch1Q3UH68 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Limch1Q3UH68 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Limch1Q3UH68 Gm10305-201ENSMUST00000195331 2475 ntBASIC15.24■□□□□ 0.03
Limch1Q3UH68 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Limch1Q3UH68 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Limch1Q3UH68 AC116503.1-201ENSMUST00000215445 2192 ntBASIC15.24■□□□□ 0.03
Limch1Q3UH68 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Limch1Q3UH68 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Limch1Q3UH68 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC15.24■□□□□ 0.03
Limch1Q3UH68 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Limch1Q3UH68 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Limch1Q3UH68 Gm14350-201ENSMUST00000116642 640 ntBASIC15.24■□□□□ 0.03
Limch1Q3UH68 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Limch1Q3UH68 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC15.24■□□□□ 0.03
Limch1Q3UH68 Gm2639-201ENSMUST00000156881 1297 ntBASIC15.24■□□□□ 0.03
Limch1Q3UH68 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Limch1Q3UH68 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Limch1Q3UH68 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.24■□□□□ 0.03
Limch1Q3UH68 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.24■□□□□ 0.03
Limch1Q3UH68 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Limch1Q3UH68 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Limch1Q3UH68 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Limch1Q3UH68 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Limch1Q3UH68 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.24■□□□□ 0.03
Limch1Q3UH68 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Limch1Q3UH68 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Limch1Q3UH68 Gm18222-201ENSMUST00000202416 1387 ntBASIC15.24■□□□□ 0.03
Limch1Q3UH68 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Limch1Q3UH68 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Limch1Q3UH68 AC155298.2-201ENSMUST00000225485 6226 ntBASIC15.23■□□□□ 0.03
Limch1Q3UH68 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Limch1Q3UH68 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Limch1Q3UH68 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Limch1Q3UH68 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC15.23■□□□□ 0.03
Limch1Q3UH68 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Limch1Q3UH68 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC15.23■□□□□ 0.03
Limch1Q3UH68 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Limch1Q3UH68 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Limch1Q3UH68 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Limch1Q3UH68 Gm5940-201ENSMUST00000117582 1068 ntBASIC15.23■□□□□ 0.03
Limch1Q3UH68 Gm11978-201ENSMUST00000122315 466 ntBASIC15.23■□□□□ 0.03
Limch1Q3UH68 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC15.23■□□□□ 0.03
Limch1Q3UH68 Gm8810-201ENSMUST00000172895 754 ntBASIC15.23■□□□□ 0.03
Limch1Q3UH68 Proscos-202ENSMUST00000178990 666 ntBASIC15.23■□□□□ 0.03
Limch1Q3UH68 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Limch1Q3UH68 AC154532.1-201ENSMUST00000227860 965 ntBASIC15.23■□□□□ 0.03
Limch1Q3UH68 Gm7399-201ENSMUST00000032395 858 ntBASIC15.23■□□□□ 0.03
Limch1Q3UH68 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Limch1Q3UH68 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms