Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.93□□□□□ -0.34
Col6a2Q02788 Gm10608-202ENSMUST00000213924 676 ntBASIC12.93□□□□□ -0.34
Col6a2Q02788 Gm45930-201ENSMUST00000221330 292 ntBASIC12.93□□□□□ -0.34
Col6a2Q02788 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a2Q02788 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a2Q02788 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Col6a2Q02788 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a2Q02788 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a2Q02788 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a2Q02788 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a2Q02788 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a2Q02788 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a2Q02788 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Col6a2Q02788 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a2Q02788 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a2Q02788 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Col6a2Q02788 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a2Q02788 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a2Q02788 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Col6a2Q02788 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a2Q02788 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a2Q02788 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a2Q02788 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a2Q02788 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a2Q02788 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Col6a2Q02788 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a2Q02788 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a2Q02788 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a2Q02788 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a2Q02788 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a2Q02788 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a2Q02788 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.92□□□□□ -0.34
Col6a2Q02788 Gm3890-201ENSMUST00000182416 207 ntBASIC12.92□□□□□ -0.34
Col6a2Q02788 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.92□□□□□ -0.34
Col6a2Q02788 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a2Q02788 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.92□□□□□ -0.34
Col6a2Q02788 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a2Q02788 Gm18584-201ENSMUST00000203098 964 ntBASIC12.92□□□□□ -0.34
Col6a2Q02788 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.92□□□□□ -0.34
Col6a2Q02788 Gm18935-201ENSMUST00000212692 664 ntBASIC12.92□□□□□ -0.34
Col6a2Q02788 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a2Q02788 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a2Q02788 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.92□□□□□ -0.34
Col6a2Q02788 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a2Q02788 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a2Q02788 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Col6a2Q02788 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a2Q02788 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a2Q02788 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Col6a2Q02788 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
Col6a2Q02788 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a2Q02788 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a2Q02788 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a2Q02788 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a2Q02788 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a2Q02788 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a2Q02788 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a2Q02788 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a2Q02788 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a2Q02788 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a2Q02788 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.91□□□□□ -0.34
Col6a2Q02788 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a2Q02788 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Col6a2Q02788 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a2Q02788 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Col6a2Q02788 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a2Q02788 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a2Q02788 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col6a2Q02788 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Col6a2Q02788 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a2Q02788 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a2Q02788 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.91□□□□□ -0.34
Col6a2Q02788 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a2Q02788 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col6a2Q02788 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a2Q02788 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a2Q02788 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.91□□□□□ -0.34
Col6a2Q02788 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.91□□□□□ -0.34
Col6a2Q02788 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.91□□□□□ -0.34
Col6a2Q02788 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.91□□□□□ -0.34
Col6a2Q02788 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.91□□□□□ -0.34
Col6a2Q02788 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.91□□□□□ -0.34
Col6a2Q02788 Mir8109-201ENSMUST00000184375 117 ntBASIC12.91□□□□□ -0.34
Col6a2Q02788 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.91□□□□□ -0.34
Col6a2Q02788 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a2Q02788 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.91□□□□□ -0.34
Col6a2Q02788 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col6a2Q02788 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.91□□□□□ -0.34
Col6a2Q02788 Gm32025-201ENSMUST00000217960 307 ntBASIC12.91□□□□□ -0.34
Col6a2Q02788 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.91□□□□□ -0.34
Col6a2Q02788 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a2Q02788 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a2Q02788 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a2Q02788 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a2Q02788 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Col6a2Q02788 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a2Q02788 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col6a2Q02788 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a2Q02788 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a2Q02788 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms