Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Col8a1Q00780 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.06□□□□□ -0.64
Col8a1Q00780 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a1Q00780 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a1Q00780 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a1Q00780 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a1Q00780 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.06□□□□□ -0.64
Col8a1Q00780 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a1Q00780 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.06□□□□□ -0.64
Col8a1Q00780 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a1Q00780 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a1Q00780 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Col8a1Q00780 Selenot-ps-201ENSMUST00000119098 593 ntBASIC11.06□□□□□ -0.64
Col8a1Q00780 Gm14665-201ENSMUST00000122294 557 ntBASIC11.06□□□□□ -0.64
Col8a1Q00780 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a1Q00780 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.06□□□□□ -0.64
Col8a1Q00780 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a1Q00780 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a1Q00780 Gm25700-201ENSMUST00000177693 110 ntBASIC11.06□□□□□ -0.64
Col8a1Q00780 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Col8a1Q00780 Gm5051-201ENSMUST00000204085 485 ntBASIC11.06□□□□□ -0.64
Col8a1Q00780 Gm44126-201ENSMUST00000204831 514 ntBASIC11.06□□□□□ -0.64
Col8a1Q00780 Gm5950-201ENSMUST00000213337 772 ntBASIC11.06□□□□□ -0.64
Col8a1Q00780 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.06□□□□□ -0.64
Col8a1Q00780 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a1Q00780 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.06□□□□□ -0.64
Col8a1Q00780 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Col8a1Q00780 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a1Q00780 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Col8a1Q00780 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a1Q00780 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a1Q00780 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Col8a1Q00780 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a1Q00780 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a1Q00780 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a1Q00780 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a1Q00780 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a1Q00780 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col8a1Q00780 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Col8a1Q00780 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.06□□□□□ -0.64
Col8a1Q00780 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.05□□□□□ -0.64
Col8a1Q00780 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a1Q00780 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.05□□□□□ -0.64
Col8a1Q00780 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a1Q00780 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a1Q00780 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a1Q00780 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Col8a1Q00780 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a1Q00780 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a1Q00780 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a1Q00780 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Col8a1Q00780 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.05□□□□□ -0.64
Col8a1Q00780 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Col8a1Q00780 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a1Q00780 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Col8a1Q00780 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Col8a1Q00780 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a1Q00780 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.05□□□□□ -0.64
Col8a1Q00780 Gm23699-201ENSMUST00000158835 135 ntBASIC11.05□□□□□ -0.64
Col8a1Q00780 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a1Q00780 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.05□□□□□ -0.64
Col8a1Q00780 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a1Q00780 Gm2546-201ENSMUST00000182630 991 ntBASIC11.05□□□□□ -0.64
Col8a1Q00780 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.05□□□□□ -0.64
Col8a1Q00780 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.05□□□□□ -0.64
Col8a1Q00780 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC11.05□□□□□ -0.64
Col8a1Q00780 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.05□□□□□ -0.64
Col8a1Q00780 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a1Q00780 Gm44545-201ENSMUST00000208262 746 ntBASIC11.05□□□□□ -0.64
Col8a1Q00780 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.05□□□□□ -0.64
Col8a1Q00780 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.05□□□□□ -0.64
Col8a1Q00780 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a1Q00780 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a1Q00780 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.05□□□□□ -0.64
Col8a1Q00780 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a1Q00780 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a1Q00780 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a1Q00780 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a1Q00780 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a1Q00780 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a1Q00780 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a1Q00780 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a1Q00780 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Col8a1Q00780 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a1Q00780 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a1Q00780 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a1Q00780 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Col8a1Q00780 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a1Q00780 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col8a1Q00780 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a1Q00780 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a1Q00780 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a1Q00780 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a1Q00780 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a1Q00780 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a1Q00780 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a1Q00780 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.04□□□□□ -0.64
Col8a1Q00780 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a1Q00780 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a1Q00780 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms