Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd3P97770 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd3P97770 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd3P97770 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd3P97770 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd3P97770 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd3P97770 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd3P97770 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd3P97770 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd3P97770 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd3P97770 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.19□□□□□ -0.3
Thumpd3P97770 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd3P97770 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd3P97770 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd3P97770 Gm15240-201ENSMUST00000118156 720 ntBASIC13.19□□□□□ -0.3
Thumpd3P97770 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.19□□□□□ -0.3
Thumpd3P97770 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.19□□□□□ -0.3
Thumpd3P97770 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.19□□□□□ -0.3
Thumpd3P97770 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd3P97770 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd3P97770 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.19□□□□□ -0.3
Thumpd3P97770 Gm27772-201ENSMUST00000184900 187 ntBASIC13.19□□□□□ -0.3
Thumpd3P97770 Gm18307-201ENSMUST00000206864 949 ntBASIC13.19□□□□□ -0.3
Thumpd3P97770 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd3P97770 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd3P97770 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd3P97770 Gm25857-201ENSMUST00000082788 129 ntBASIC13.19□□□□□ -0.3
Thumpd3P97770 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
Thumpd3P97770 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Thumpd3P97770 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd3P97770 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd3P97770 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd3P97770 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Thumpd3P97770 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd3P97770 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd3P97770 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd3P97770 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Thumpd3P97770 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd3P97770 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd3P97770 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd3P97770 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.18□□□□□ -0.3
Thumpd3P97770 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.18□□□□□ -0.3
Thumpd3P97770 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd3P97770 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd3P97770 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
Thumpd3P97770 Gm15824-201ENSMUST00000119516 955 ntBASIC13.18□□□□□ -0.3
Thumpd3P97770 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.18□□□□□ -0.3
Thumpd3P97770 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.18□□□□□ -0.3
Thumpd3P97770 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd3P97770 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.18□□□□□ -0.3
Thumpd3P97770 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd3P97770 Gm9002-201ENSMUST00000178437 499 ntBASIC13.18□□□□□ -0.3
Thumpd3P97770 Gm27701-201ENSMUST00000184498 110 ntBASIC13.18□□□□□ -0.3
Thumpd3P97770 Gm28911-201ENSMUST00000188837 117 ntBASIC13.18□□□□□ -0.3
Thumpd3P97770 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.18□□□□□ -0.3
Thumpd3P97770 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.18□□□□□ -0.3
Thumpd3P97770 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.18□□□□□ -0.3
Thumpd3P97770 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd3P97770 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.18□□□□□ -0.3
Thumpd3P97770 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd3P97770 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd3P97770 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd3P97770 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd3P97770 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd3P97770 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd3P97770 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd3P97770 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd3P97770 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Thumpd3P97770 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Thumpd3P97770 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Thumpd3P97770 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd3P97770 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.17□□□□□ -0.3
Thumpd3P97770 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd3P97770 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd3P97770 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd3P97770 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd3P97770 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd3P97770 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Thumpd3P97770 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd3P97770 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Thumpd3P97770 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.17□□□□□ -0.3
Thumpd3P97770 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd3P97770 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Thumpd3P97770 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd3P97770 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd3P97770 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd3P97770 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd3P97770 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd3P97770 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Thumpd3P97770 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd3P97770 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd3P97770 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.17□□□□□ -0.3
Thumpd3P97770 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.17□□□□□ -0.3
Thumpd3P97770 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.17□□□□□ -0.3
Thumpd3P97770 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.17□□□□□ -0.3
Thumpd3P97770 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd3P97770 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.17□□□□□ -0.3
Thumpd3P97770 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.17□□□□□ -0.3
Thumpd3P97770 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Thumpd3P97770 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms