Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Shox2P70390 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Shox2P70390 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Shox2P70390 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.77□□□□□ -0.36
Shox2P70390 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Shox2P70390 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.77□□□□□ -0.37
Shox2P70390 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Shox2P70390 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shox2P70390 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shox2P70390 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Shox2P70390 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shox2P70390 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shox2P70390 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Shox2P70390 Gm15393-201ENSMUST00000120499 219 ntBASIC12.77□□□□□ -0.37
Shox2P70390 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.77□□□□□ -0.37
Shox2P70390 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.77□□□□□ -0.37
Shox2P70390 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.77□□□□□ -0.37
Shox2P70390 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Shox2P70390 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Shox2P70390 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.77□□□□□ -0.37
Shox2P70390 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.77□□□□□ -0.37
Shox2P70390 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Shox2P70390 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.77□□□□□ -0.37
Shox2P70390 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shox2P70390 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shox2P70390 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.77□□□□□ -0.37
Shox2P70390 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Shox2P70390 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.77□□□□□ -0.37
Shox2P70390 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shox2P70390 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shox2P70390 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shox2P70390 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Shox2P70390 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shox2P70390 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shox2P70390 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shox2P70390 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Shox2P70390 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Shox2P70390 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Shox2P70390 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Shox2P70390 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.77□□□□□ -0.37
Shox2P70390 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shox2P70390 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Shox2P70390 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Shox2P70390 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shox2P70390 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Shox2P70390 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Shox2P70390 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.76□□□□□ -0.37
Shox2P70390 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shox2P70390 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shox2P70390 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.76□□□□□ -0.37
Shox2P70390 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shox2P70390 Gm15653-201ENSMUST00000119247 907 ntBASIC12.76□□□□□ -0.37
Shox2P70390 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.76□□□□□ -0.37
Shox2P70390 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.76□□□□□ -0.37
Shox2P70390 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.76□□□□□ -0.37
Shox2P70390 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Shox2P70390 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.76□□□□□ -0.37
Shox2P70390 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.76□□□□□ -0.37
Shox2P70390 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.76□□□□□ -0.37
Shox2P70390 Gm9229-201ENSMUST00000222777 126 ntBASIC12.76□□□□□ -0.37
Shox2P70390 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Shox2P70390 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Shox2P70390 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.76□□□□□ -0.37
Shox2P70390 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.76□□□□□ -0.37
Shox2P70390 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Shox2P70390 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shox2P70390 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shox2P70390 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Shox2P70390 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shox2P70390 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shox2P70390 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Shox2P70390 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Shox2P70390 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shox2P70390 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shox2P70390 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Shox2P70390 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shox2P70390 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shox2P70390 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Shox2P70390 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shox2P70390 Gm24543-201ENSMUST00000103867 82 ntBASIC12.75□□□□□ -0.37
Shox2P70390 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Shox2P70390 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Shox2P70390 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Shox2P70390 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shox2P70390 Gm13813-201ENSMUST00000120998 787 ntBASIC12.75□□□□□ -0.37
Shox2P70390 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shox2P70390 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shox2P70390 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shox2P70390 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Shox2P70390 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Shox2P70390 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Shox2P70390 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.75□□□□□ -0.37
Shox2P70390 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shox2P70390 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.75□□□□□ -0.37
Shox2P70390 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.75□□□□□ -0.37
Shox2P70390 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.75□□□□□ -0.37
Shox2P70390 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Shox2P70390 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shox2P70390 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shox2P70390 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms