Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Crnkl1P63154 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Crnkl1P63154 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.82□□□□□ -0.36
Crnkl1P63154 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Crnkl1P63154 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Crnkl1P63154 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.82□□□□□ -0.36
Crnkl1P63154 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.82□□□□□ -0.36
Crnkl1P63154 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.82□□□□□ -0.36
Crnkl1P63154 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.82□□□□□ -0.36
Crnkl1P63154 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Crnkl1P63154 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.82□□□□□ -0.36
Crnkl1P63154 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.82□□□□□ -0.36
Crnkl1P63154 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.82□□□□□ -0.36
Crnkl1P63154 Gm14057-201ENSMUST00000120631 482 ntBASIC12.82□□□□□ -0.36
Crnkl1P63154 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.82□□□□□ -0.36
Crnkl1P63154 Gm20949-201ENSMUST00000206478 952 ntBASIC12.82□□□□□ -0.36
Crnkl1P63154 Gm46209-201ENSMUST00000217912 553 ntBASIC12.82□□□□□ -0.36
Crnkl1P63154 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.82□□□□□ -0.36
Crnkl1P63154 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.82□□□□□ -0.36
Crnkl1P63154 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Crnkl1P63154 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Crnkl1P63154 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Crnkl1P63154 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.82□□□□□ -0.36
Crnkl1P63154 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.82□□□□□ -0.36
Crnkl1P63154 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.82□□□□□ -0.36
Crnkl1P63154 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Crnkl1P63154 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Crnkl1P63154 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Crnkl1P63154 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.81□□□□□ -0.36
Crnkl1P63154 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Crnkl1P63154 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Crnkl1P63154 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Crnkl1P63154 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Crnkl1P63154 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.81□□□□□ -0.36
Crnkl1P63154 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Crnkl1P63154 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Crnkl1P63154 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Crnkl1P63154 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Crnkl1P63154 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Crnkl1P63154 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.81□□□□□ -0.36
Crnkl1P63154 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Crnkl1P63154 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.81□□□□□ -0.36
Crnkl1P63154 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Crnkl1P63154 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Crnkl1P63154 Mir698-201ENSMUST00000102164 109 ntBASIC12.81□□□□□ -0.36
Crnkl1P63154 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Crnkl1P63154 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Crnkl1P63154 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.81□□□□□ -0.36
Crnkl1P63154 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.81□□□□□ -0.36
Crnkl1P63154 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Crnkl1P63154 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.81□□□□□ -0.36
Crnkl1P63154 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.81□□□□□ -0.36
Crnkl1P63154 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Crnkl1P63154 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Crnkl1P63154 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Crnkl1P63154 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Crnkl1P63154 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Crnkl1P63154 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Crnkl1P63154 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Crnkl1P63154 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Crnkl1P63154 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Crnkl1P63154 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Crnkl1P63154 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Crnkl1P63154 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms