Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.14□□□□□ -0.31
Ddx6P54823 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.14□□□□□ -0.31
Ddx6P54823 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.14□□□□□ -0.31
Ddx6P54823 Gm13875-201ENSMUST00000120162 282 ntBASIC13.14□□□□□ -0.31
Ddx6P54823 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.14□□□□□ -0.31
Ddx6P54823 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.14□□□□□ -0.31
Ddx6P54823 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 Gm37201-201ENSMUST00000191845 523 ntBASIC13.14□□□□□ -0.31
Ddx6P54823 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.14□□□□□ -0.31
Ddx6P54823 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.14□□□□□ -0.31
Ddx6P54823 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.14□□□□□ -0.31
Ddx6P54823 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.14□□□□□ -0.31
Ddx6P54823 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.14□□□□□ -0.31
Ddx6P54823 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ddx6P54823 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.14□□□□□ -0.31
Ddx6P54823 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.14□□□□□ -0.31
Ddx6P54823 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ddx6P54823 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ddx6P54823 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.14□□□□□ -0.31
Ddx6P54823 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx6P54823 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ddx6P54823 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ddx6P54823 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.13□□□□□ -0.31
Ddx6P54823 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Ddx6P54823 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Ddx6P54823 Gm13736-201ENSMUST00000119272 253 ntBASIC13.13□□□□□ -0.31
Ddx6P54823 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Ddx6P54823 Gm8018-201ENSMUST00000173536 789 ntBASIC13.13□□□□□ -0.31
Ddx6P54823 Gm27046-201ENSMUST00000182160 463 ntBASIC13.13□□□□□ -0.31
Ddx6P54823 Gm27023-201ENSMUST00000182372 285 ntBASIC13.13□□□□□ -0.31
Ddx6P54823 Gm38317-201ENSMUST00000195564 343 ntBASIC13.13□□□□□ -0.31
Ddx6P54823 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.13□□□□□ -0.31
Ddx6P54823 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ddx6P54823 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.13□□□□□ -0.31
Ddx6P54823 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.13□□□□□ -0.31
Ddx6P54823 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx6P54823 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms