Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx3P50481 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx3P50481 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Lhx3P50481 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx3P50481 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx3P50481 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx3P50481 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx3P50481 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx3P50481 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx3P50481 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx3P50481 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx3P50481 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx3P50481 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx3P50481 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Lhx3P50481 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx3P50481 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.1□□□□□ -0.31
Lhx3P50481 Gm16296-201ENSMUST00000159905 325 ntBASIC13.1□□□□□ -0.31
Lhx3P50481 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.1□□□□□ -0.31
Lhx3P50481 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Lhx3P50481 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx3P50481 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx3P50481 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx3P50481 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx3P50481 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx3P50481 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Lhx3P50481 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx3P50481 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx3P50481 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx3P50481 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.1□□□□□ -0.31
Lhx3P50481 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.1□□□□□ -0.31
Lhx3P50481 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx3P50481 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lhx3P50481 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Lhx3P50481 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx3P50481 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.09□□□□□ -0.31
Lhx3P50481 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx3P50481 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx3P50481 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx3P50481 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx3P50481 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx3P50481 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx3P50481 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Lhx3P50481 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.09□□□□□ -0.31
Lhx3P50481 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx3P50481 Gm6023-201ENSMUST00000118217 606 ntBASIC13.09□□□□□ -0.31
Lhx3P50481 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.09□□□□□ -0.31
Lhx3P50481 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.09□□□□□ -0.31
Lhx3P50481 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Lhx3P50481 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx3P50481 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx3P50481 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx3P50481 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Lhx3P50481 Gm6013-201ENSMUST00000212264 699 ntBASIC13.09□□□□□ -0.31
Lhx3P50481 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx3P50481 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.09□□□□□ -0.31
Lhx3P50481 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx3P50481 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx3P50481 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.09□□□□□ -0.31
Lhx3P50481 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Lhx3P50481 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx3P50481 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx3P50481 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx3P50481 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx3P50481 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx3P50481 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx3P50481 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx3P50481 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.09□□□□□ -0.31
Lhx3P50481 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx3P50481 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx3P50481 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx3P50481 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx3P50481 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx3P50481 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lhx3P50481 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lhx3P50481 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.08□□□□□ -0.31
Lhx3P50481 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lhx3P50481 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx3P50481 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx3P50481 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx3P50481 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx3P50481 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx3P50481 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx3P50481 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx3P50481 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.08□□□□□ -0.32
Lhx3P50481 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.08□□□□□ -0.32
Lhx3P50481 Mir1938-201ENSMUST00000158746 100 ntBASIC13.08□□□□□ -0.32
Lhx3P50481 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.08□□□□□ -0.32
Lhx3P50481 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.08□□□□□ -0.32
Lhx3P50481 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.08□□□□□ -0.32
Lhx3P50481 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.08□□□□□ -0.32
Lhx3P50481 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.08□□□□□ -0.32
Lhx3P50481 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Lhx3P50481 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.08□□□□□ -0.32
Lhx3P50481 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.08□□□□□ -0.32
Lhx3P50481 Gm7399-201ENSMUST00000032395 858 ntBASIC13.08□□□□□ -0.32
Lhx3P50481 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lhx3P50481 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Lhx3P50481 Gm24526-201ENSMUST00000082921 158 ntBASIC13.08□□□□□ -0.32
Lhx3P50481 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Lhx3P50481 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms