Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx2P48379 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Rfx2P48379 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx2P48379 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx2P48379 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx2P48379 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.59□□□□□ -0.23
Rfx2P48379 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rfx2P48379 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.59□□□□□ -0.23
Rfx2P48379 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.59□□□□□ -0.23
Rfx2P48379 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx2P48379 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rfx2P48379 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rfx2P48379 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Rfx2P48379 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rfx2P48379 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rfx2P48379 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Rfx2P48379 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.58□□□□□ -0.24
Rfx2P48379 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfx2P48379 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.58□□□□□ -0.24
Rfx2P48379 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfx2P48379 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rfx2P48379 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfx2P48379 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfx2P48379 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rfx2P48379 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rfx2P48379 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rfx2P48379 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.58□□□□□ -0.24
Rfx2P48379 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.58□□□□□ -0.24
Rfx2P48379 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfx2P48379 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.58□□□□□ -0.24
Rfx2P48379 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.58□□□□□ -0.24
Rfx2P48379 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.58□□□□□ -0.24
Rfx2P48379 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.58□□□□□ -0.24
Rfx2P48379 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.58□□□□□ -0.24
Rfx2P48379 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfx2P48379 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.58□□□□□ -0.24
Rfx2P48379 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfx2P48379 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfx2P48379 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rfx2P48379 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.58□□□□□ -0.24
Rfx2P48379 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfx2P48379 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rfx2P48379 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfx2P48379 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Rfx2P48379 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rfx2P48379 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.58□□□□□ -0.24
Rfx2P48379 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rfx2P48379 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rfx2P48379 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rfx2P48379 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rfx2P48379 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rfx2P48379 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rfx2P48379 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rfx2P48379 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rfx2P48379 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rfx2P48379 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.57□□□□□ -0.24
Rfx2P48379 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rfx2P48379 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rfx2P48379 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rfx2P48379 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Rfx2P48379 Mir686-201ENSMUST00000102174 109 ntBASIC13.57□□□□□ -0.24
Rfx2P48379 Gm6447-201ENSMUST00000118905 835 ntBASIC13.57□□□□□ -0.24
Rfx2P48379 Gm13123-201ENSMUST00000122173 492 ntBASIC13.57□□□□□ -0.24
Rfx2P48379 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.57□□□□□ -0.24
Rfx2P48379 Gm16379-201ENSMUST00000161469 348 ntBASIC13.57□□□□□ -0.24
Rfx2P48379 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.57□□□□□ -0.24
Rfx2P48379 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rfx2P48379 Gm8762-201ENSMUST00000193486 339 ntBASIC13.57□□□□□ -0.24
Rfx2P48379 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.57□□□□□ -0.24
Rfx2P48379 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.57□□□□□ -0.24
Rfx2P48379 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.57□□□□□ -0.24
Rfx2P48379 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rfx2P48379 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rfx2P48379 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Rfx2P48379 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rfx2P48379 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Rfx2P48379 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rfx2P48379 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Rfx2P48379 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
Rfx2P48379 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rfx2P48379 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfx2P48379 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rfx2P48379 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.56□□□□□ -0.24
Rfx2P48379 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.56□□□□□ -0.24
Rfx2P48379 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rfx2P48379 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rfx2P48379 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfx2P48379 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rfx2P48379 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfx2P48379 Gm11637-201ENSMUST00000120601 592 ntBASIC13.56□□□□□ -0.24
Rfx2P48379 Gm25927-201ENSMUST00000175058 117 ntBASIC13.56□□□□□ -0.24
Rfx2P48379 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rfx2P48379 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfx2P48379 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfx2P48379 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfx2P48379 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rfx2P48379 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfx2P48379 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Rfx2P48379 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfx2P48379 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms