Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HttP42859 Gm24934-201ENSMUST00000103764 111 ntBASIC13.37□□□□□ -0.27
HttP42859 Gm19587-201ENSMUST00000191395 545 ntBASIC13.37□□□□□ -0.27
HttP42859 CT485606.1-201ENSMUST00000213187 878 ntBASIC13.37□□□□□ -0.27
HttP42859 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HttP42859 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HttP42859 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HttP42859 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.37□□□□□ -0.27
HttP42859 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HttP42859 n-R5s64-201ENSMUST00000102019 119 ntBASIC13.37□□□□□ -0.27
HttP42859 Gm12164-201ENSMUST00000121695 551 ntBASIC13.37□□□□□ -0.27
HttP42859 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
HttP42859 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC13.37□□□□□ -0.27
HttP42859 Gm43912-201ENSMUST00000204352 538 ntBASIC13.37□□□□□ -0.27
HttP42859 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HttP42859 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
HttP42859 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
HttP42859 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HttP42859 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HttP42859 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HttP42859 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HttP42859 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HttP42859 Gm18367-201ENSMUST00000176139 600 ntBASIC13.36□□□□□ -0.27
HttP42859 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HttP42859 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HttP42859 AC165154.1-201ENSMUST00000226661 340 ntBASIC13.36□□□□□ -0.27
HttP42859 AC102368.1-201ENSMUST00000227161 892 ntBASIC13.36□□□□□ -0.27
HttP42859 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HttP42859 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
HttP42859 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HttP42859 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HttP42859 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HttP42859 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HttP42859 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HttP42859 Gm22442-201ENSMUST00000157256 144 ntBASIC13.36□□□□□ -0.27
HttP42859 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HttP42859 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.36□□□□□ -0.27
HttP42859 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HttP42859 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
HttP42859 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HttP42859 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
HttP42859 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HttP42859 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
HttP42859 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HttP42859 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
HttP42859 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HttP42859 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HttP42859 Gm25766-201ENSMUST00000104101 131 ntBASIC13.35□□□□□ -0.27
HttP42859 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
HttP42859 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
HttP42859 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HttP42859 Gm29410-201ENSMUST00000188383 694 ntBASIC13.35□□□□□ -0.27
HttP42859 AC136376.2-201ENSMUST00000228819 490 ntBASIC13.35□□□□□ -0.27
HttP42859 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
HttP42859 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HttP42859 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
HttP42859 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
HttP42859 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
HttP42859 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HttP42859 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
HttP42859 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HttP42859 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
HttP42859 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HttP42859 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HttP42859 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
HttP42859 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC13.35□□□□□ -0.27
HttP42859 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
HttP42859 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HttP42859 Gm7904-201ENSMUST00000217049 465 ntBASIC13.35□□□□□ -0.27
HttP42859 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.35□□□□□ -0.27
HttP42859 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HttP42859 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HttP42859 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HttP42859 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HttP42859 Gm24791-201ENSMUST00000104284 131 ntBASIC13.35□□□□□ -0.27
HttP42859 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC13.35□□□□□ -0.27
HttP42859 Gm23119-201ENSMUST00000158610 140 ntBASIC13.35□□□□□ -0.27
HttP42859 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HttP42859 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
HttP42859 Gm3551-201ENSMUST00000190750 664 ntBASIC13.35□□□□□ -0.27
HttP42859 Gm9916-201ENSMUST00000192943 1228 ntBASIC13.35□□□□□ -0.27
HttP42859 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
HttP42859 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
HttP42859 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.35□□□□□ -0.27
HttP42859 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HttP42859 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HttP42859 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HttP42859 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HttP42859 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HttP42859 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HttP42859 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HttP42859 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
HttP42859 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HttP42859 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HttP42859 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HttP42859 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HttP42859 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
HttP42859 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
HttP42859 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC13.34□□□□□ -0.27
HttP42859 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms