Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl28P41105 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Rpl28P41105 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl28P41105 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl28P41105 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl28P41105 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl28P41105 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl28P41105 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl28P41105 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl28P41105 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl28P41105 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Rpl28P41105 AC124751.1-201ENSMUST00000222716 1408 ntBASIC8.71□□□□□ -1.01
Rpl28P41105 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Rpl28P41105 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Rpl28P41105 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Rpl28P41105 Gm37391-201ENSMUST00000194891 2318 ntBASIC8.71□□□□□ -1.01
Rpl28P41105 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Rpl28P41105 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Rpl28P41105 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Rpl28P41105 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Rpl28P41105 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Rpl28P41105 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Rpl28P41105 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC8.71□□□□□ -1.01
Rpl28P41105 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Rpl28P41105 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Rpl28P41105 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Rpl28P41105 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Rpl28P41105 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rpl28P41105 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
Rpl28P41105 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rpl28P41105 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rpl28P41105 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Rpl28P41105 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rpl28P41105 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.02
Rpl28P41105 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC8.71□□□□□ -1.02
Rpl28P41105 Gm24420-201ENSMUST00000176676 59 ntBASIC8.71□□□□□ -1.02
Rpl28P41105 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC8.71□□□□□ -1.02
Rpl28P41105 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Rpl28P41105 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC8.71□□□□□ -1.02
Rpl28P41105 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC8.71□□□□□ -1.02
Rpl28P41105 Gm18636-201ENSMUST00000218846 1066 ntBASIC8.71□□□□□ -1.02
Rpl28P41105 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rpl28P41105 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rpl28P41105 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rpl28P41105 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rpl28P41105 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Rpl28P41105 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Rpl28P41105 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rpl28P41105 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rpl28P41105 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rpl28P41105 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rpl28P41105 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rpl28P41105 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Rpl28P41105 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rpl28P41105 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Rpl28P41105 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rpl28P41105 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rpl28P41105 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rpl28P41105 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rpl28P41105 Gm43045-201ENSMUST00000198725 2095 ntBASIC8.71□□□□□ -1.02
Rpl28P41105 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.02
Rpl28P41105 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Rpl28P41105 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rpl28P41105 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC8.71□□□□□ -1.02
Rpl28P41105 Gm7104-201ENSMUST00000179741 2532 ntBASIC8.71□□□□□ -1.02
Rpl28P41105 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rpl28P41105 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rpl28P41105 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rpl28P41105 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rpl28P41105 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rpl28P41105 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rpl28P41105 Gm44806-201ENSMUST00000205574 2303 ntBASIC8.7□□□□□ -1.02
Rpl28P41105 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rpl28P41105 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rpl28P41105 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Rpl28P41105 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Rpl28P41105 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rpl28P41105 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rpl28P41105 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rpl28P41105 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Rpl28P41105 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC8.7□□□□□ -1.02
Rpl28P41105 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rpl28P41105 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rpl28P41105 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rpl28P41105 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Rpl28P41105 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rpl28P41105 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Rpl28P41105 Gm4204-201ENSMUST00000110798 1231 ntBASIC8.7□□□□□ -1.02
Rpl28P41105 Gm12428-201ENSMUST00000119844 727 ntBASIC8.7□□□□□ -1.02
Rpl28P41105 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC8.7□□□□□ -1.02
Rpl28P41105 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC8.7□□□□□ -1.02
Rpl28P41105 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Rpl28P41105 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Rpl28P41105 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC8.7□□□□□ -1.02
Rpl28P41105 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
Rpl28P41105 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rpl28P41105 Mir6956-201ENSMUST00000183598 62 ntBASIC8.7□□□□□ -1.02
Rpl28P41105 Gm27618-201ENSMUST00000183671 60 ntBASIC8.7□□□□□ -1.02
Rpl28P41105 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC8.7□□□□□ -1.02
Rpl28P41105 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms