Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.65□□□□□ -0.7
Timp3P39876 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Timp3P39876 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Timp3P39876 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Timp3P39876 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Timp3P39876 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Timp3P39876 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.65□□□□□ -0.71
Timp3P39876 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Timp3P39876 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Timp3P39876 Gm5939-201ENSMUST00000119613 2874 ntBASIC10.64□□□□□ -0.71
Timp3P39876 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Timp3P39876 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Timp3P39876 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Timp3P39876 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Timp3P39876 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC10.64□□□□□ -0.71
Timp3P39876 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Timp3P39876 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.64□□□□□ -0.71
Timp3P39876 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Timp3P39876 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Timp3P39876 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC10.64□□□□□ -0.71
Timp3P39876 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC10.64□□□□□ -0.71
Timp3P39876 Gm44891-201ENSMUST00000208817 2223 ntBASIC10.64□□□□□ -0.71
Timp3P39876 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Timp3P39876 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
Timp3P39876 Gm37922-201ENSMUST00000195596 455 ntBASIC10.64□□□□□ -0.71
Timp3P39876 Gm45331-201ENSMUST00000209868 554 ntBASIC10.64□□□□□ -0.71
Timp3P39876 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Timp3P39876 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.64□□□□□ -0.71
Timp3P39876 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Timp3P39876 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Timp3P39876 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Timp3P39876 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Timp3P39876 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.64□□□□□ -0.71
Timp3P39876 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Timp3P39876 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Timp3P39876 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Timp3P39876 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Timp3P39876 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Timp3P39876 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Timp3P39876 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Timp3P39876 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Timp3P39876 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.64□□□□□ -0.71
Timp3P39876 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.63□□□□□ -0.71
Timp3P39876 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
Timp3P39876 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.63□□□□□ -0.71
Timp3P39876 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Timp3P39876 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC10.63□□□□□ -0.71
Timp3P39876 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC10.63□□□□□ -0.71
Timp3P39876 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Timp3P39876 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.63□□□□□ -0.71
Timp3P39876 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
Timp3P39876 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC10.63□□□□□ -0.71
Timp3P39876 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Gm11618-201ENSMUST00000117946 267 ntBASIC10.63□□□□□ -0.71
Timp3P39876 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC10.63□□□□□ -0.71
Timp3P39876 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.63□□□□□ -0.71
Timp3P39876 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Gm37497-201ENSMUST00000195830 798 ntBASIC10.63□□□□□ -0.71
Timp3P39876 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.63□□□□□ -0.71
Timp3P39876 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
Timp3P39876 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.63□□□□□ -0.71
Timp3P39876 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Timp3P39876 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Timp3P39876 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Timp3P39876 Pck2-205ENSMUST00000226352 2784 ntBASIC10.63□□□□□ -0.71
Timp3P39876 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC10.63□□□□□ -0.71
Timp3P39876 Gm45242-201ENSMUST00000210666 2129 ntBASIC10.63□□□□□ -0.71
Timp3P39876 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Timp3P39876 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms