Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxc5P32043 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxc5P32043 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxc5P32043 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxc5P32043 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxc5P32043 Matn2-203ENSMUST00000226766 3252 ntBASIC12.02□□□□□ -0.48
Hoxc5P32043 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc5P32043 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc5P32043 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.02□□□□□ -0.49
Hoxc5P32043 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc5P32043 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.02□□□□□ -0.49
Hoxc5P32043 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc5P32043 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc5P32043 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.02□□□□□ -0.49
Hoxc5P32043 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.02□□□□□ -0.49
Hoxc5P32043 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc5P32043 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.02□□□□□ -0.49
Hoxc5P32043 Mir7654-201ENSMUST00000185082 70 ntBASIC12.02□□□□□ -0.49
Hoxc5P32043 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Hoxc5P32043 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.02□□□□□ -0.49
Hoxc5P32043 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.02□□□□□ -0.49
Hoxc5P32043 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Hoxc5P32043 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc5P32043 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Hoxc5P32043 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc5P32043 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc5P32043 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc5P32043 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.02□□□□□ -0.49
Hoxc5P32043 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc5P32043 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc5P32043 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc5P32043 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.02□□□□□ -0.49
Hoxc5P32043 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc5P32043 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc5P32043 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.02□□□□□ -0.49
Hoxc5P32043 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.02□□□□□ -0.49
Hoxc5P32043 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.01□□□□□ -0.49
Hoxc5P32043 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.01□□□□□ -0.49
Hoxc5P32043 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Gm7488-201ENSMUST00000117148 684 ntBASIC12.01□□□□□ -0.49
Hoxc5P32043 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.01□□□□□ -0.49
Hoxc5P32043 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Hoxc5P32043 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.01□□□□□ -0.49
Hoxc5P32043 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Hoxc5P32043 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.01□□□□□ -0.49
Hoxc5P32043 Gm6983-201ENSMUST00000214912 628 ntBASIC12.01□□□□□ -0.49
Hoxc5P32043 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Hoxc5P32043 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.01□□□□□ -0.49
Hoxc5P32043 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.01□□□□□ -0.49
Hoxc5P32043 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.01□□□□□ -0.49
Hoxc5P32043 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.01□□□□□ -0.49
Hoxc5P32043 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.01□□□□□ -0.49
Hoxc5P32043 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxc5P32043 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxc5P32043 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxc5P32043 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxc5P32043 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxc5P32043 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Hoxc5P32043 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxc5P32043 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hoxc5P32043 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Hoxc5P32043 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Hoxc5P32043 Gm15371-201ENSMUST00000117057 784 ntBASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms