Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a11P31650 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.32□□□□□ -0.44
Slc6a11P31650 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a11P31650 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a11P31650 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
Slc6a11P31650 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a11P31650 Snora78-201ENSMUST00000158630 128 ntBASIC12.32□□□□□ -0.44
Slc6a11P31650 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
Slc6a11P31650 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a11P31650 Gm19931-201ENSMUST00000198920 368 ntBASIC12.32□□□□□ -0.44
Slc6a11P31650 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a11P31650 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a11P31650 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Slc6a11P31650 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a11P31650 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a11P31650 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.32□□□□□ -0.44
Slc6a11P31650 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a11P31650 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a11P31650 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a11P31650 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a11P31650 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a11P31650 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a11P31650 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a11P31650 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a11P31650 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a11P31650 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a11P31650 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Slc6a11P31650 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a11P31650 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a11P31650 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a11P31650 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a11P31650 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a11P31650 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slc6a11P31650 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.31□□□□□ -0.44
Slc6a11P31650 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a11P31650 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Slc6a11P31650 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a11P31650 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a11P31650 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Slc6a11P31650 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a11P31650 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a11P31650 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a11P31650 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a11P31650 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Slc6a11P31650 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a11P31650 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.31□□□□□ -0.44
Slc6a11P31650 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a11P31650 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Slc6a11P31650 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a11P31650 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Slc6a11P31650 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.31□□□□□ -0.44
Slc6a11P31650 Gm5279-201ENSMUST00000199575 745 ntBASIC12.31□□□□□ -0.44
Slc6a11P31650 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.31□□□□□ -0.44
Slc6a11P31650 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.31□□□□□ -0.44
Slc6a11P31650 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a11P31650 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.31□□□□□ -0.44
Slc6a11P31650 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a11P31650 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.31□□□□□ -0.44
Slc6a11P31650 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Slc6a11P31650 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a11P31650 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Slc6a11P31650 Gm10478-201ENSMUST00000084451 396 ntBASIC12.31□□□□□ -0.44
Slc6a11P31650 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Slc6a11P31650 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a11P31650 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a11P31650 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a11P31650 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.31□□□□□ -0.44
Slc6a11P31650 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a11P31650 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Slc6a11P31650 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a11P31650 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a11P31650 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Slc6a11P31650 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a11P31650 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a11P31650 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a11P31650 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Slc6a11P31650 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a11P31650 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Slc6a11P31650 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a11P31650 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a11P31650 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a11P31650 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a11P31650 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a11P31650 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.3□□□□□ -0.44
Slc6a11P31650 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a11P31650 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a11P31650 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a11P31650 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a11P31650 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a11P31650 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a11P31650 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a11P31650 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.3□□□□□ -0.44
Slc6a11P31650 Gm13226-201ENSMUST00000117838 404 ntBASIC12.3□□□□□ -0.44
Slc6a11P31650 Gm8062-201ENSMUST00000139696 444 ntBASIC12.3□□□□□ -0.44
Slc6a11P31650 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.3□□□□□ -0.44
Slc6a11P31650 Gm45784-201ENSMUST00000188360 142 ntBASIC12.3□□□□□ -0.44
Slc6a11P31650 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a11P31650 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.3□□□□□ -0.44
Slc6a11P31650 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a11P31650 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms