Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl6P27784 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl6P27784 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl6P27784 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl6P27784 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl6P27784 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
Ccl6P27784 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl6P27784 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl6P27784 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl6P27784 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.1□□□□□ -0.79
Ccl6P27784 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl6P27784 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl6P27784 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl6P27784 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl6P27784 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl6P27784 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl6P27784 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl6P27784 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl6P27784 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl6P27784 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl6P27784 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl6P27784 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl6P27784 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl6P27784 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl6P27784 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl6P27784 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Ccl6P27784 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Ccl6P27784 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl6P27784 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl6P27784 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl6P27784 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
Ccl6P27784 Gm14350-201ENSMUST00000116642 640 ntBASIC10.09□□□□□ -0.79
Ccl6P27784 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl6P27784 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
Ccl6P27784 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10.09□□□□□ -0.79
Ccl6P27784 Gm27701-201ENSMUST00000184498 110 ntBASIC10.09□□□□□ -0.79
Ccl6P27784 Gm38671-201ENSMUST00000200573 130 ntBASIC10.09□□□□□ -0.79
Ccl6P27784 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC10.09□□□□□ -0.79
Ccl6P27784 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl6P27784 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl6P27784 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl6P27784 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Ccl6P27784 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl6P27784 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl6P27784 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Ccl6P27784 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl6P27784 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl6P27784 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.09□□□□□ -0.79
Ccl6P27784 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl6P27784 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl6P27784 Ankra2-208ENSMUST00000226100 1476 ntBASIC10.09□□□□□ -0.79
Ccl6P27784 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC10.09□□□□□ -0.79
Ccl6P27784 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl6P27784 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl6P27784 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl6P27784 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Ccl6P27784 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl6P27784 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl6P27784 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl6P27784 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl6P27784 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl6P27784 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl6P27784 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl6P27784 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl6P27784 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl6P27784 Gm5912-201ENSMUST00000122282 1438 ntBASIC10.08□□□□□ -0.8
Ccl6P27784 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl6P27784 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl6P27784 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl6P27784 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl6P27784 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl6P27784 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.08□□□□□ -0.8
Ccl6P27784 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl6P27784 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl6P27784 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
Ccl6P27784 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl6P27784 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC10.08□□□□□ -0.8
Ccl6P27784 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl6P27784 Gm6152-201ENSMUST00000151704 340 ntBASIC10.08□□□□□ -0.8
Ccl6P27784 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Ccl6P27784 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl6P27784 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl6P27784 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.08□□□□□ -0.8
Ccl6P27784 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl6P27784 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl6P27784 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Ccl6P27784 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl6P27784 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Ccl6P27784 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl6P27784 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl6P27784 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Ccl6P27784 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl6P27784 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl6P27784 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl6P27784 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl6P27784 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.08□□□□□ -0.8
Ccl6P27784 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl6P27784 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl6P27784 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl6P27784 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms