Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Gm42471-201ENSMUST00000201457 1865 ntBASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Gm10327-201ENSMUST00000105222 1002 ntBASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Gm12882-201ENSMUST00000121696 517 ntBASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Gm22331-201ENSMUST00000158066 136 ntBASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Gm37714-201ENSMUST00000194742 342 ntBASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Gm37466-201ENSMUST00000195692 652 ntBASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Gm42474-201ENSMUST00000201073 505 ntBASIC10.75□□□□□ -0.69
Tnfrsf9P20334 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Gm10012-201ENSMUST00000078252 192 ntBASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Gm45630-201ENSMUST00000210243 1911 ntBASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Gm37411-201ENSMUST00000194180 2282 ntBASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Ssr1-204ENSMUST00000225319 1610 ntBASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Gm7553-201ENSMUST00000185805 1426 ntBASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 Gm16177-201ENSMUST00000120728 718 ntBASIC10.74□□□□□ -0.69
Tnfrsf9P20334 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.74□□□□□ -0.69
Tnfrsf9P20334 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 Gm25653-201ENSMUST00000158473 138 ntBASIC10.74□□□□□ -0.69
Tnfrsf9P20334 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC10.74□□□□□ -0.69
Tnfrsf9P20334 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Tnfrsf9P20334 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms