Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Msx1P13297 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Msx1P13297 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Msx1P13297 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.41□□□□□ -0.42
Msx1P13297 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Msx1P13297 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.41□□□□□ -0.42
Msx1P13297 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Msx1P13297 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.41□□□□□ -0.42
Msx1P13297 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Msx1P13297 Gm18041-201ENSMUST00000218210 618 ntBASIC12.41□□□□□ -0.42
Msx1P13297 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.41□□□□□ -0.42
Msx1P13297 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.41□□□□□ -0.42
Msx1P13297 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC12.41□□□□□ -0.42
Msx1P13297 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Msx1P13297 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Msx1P13297 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Msx1P13297 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Msx1P13297 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Msx1P13297 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Msx1P13297 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Msx1P13297 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Msx1P13297 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Msx1P13297 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.41□□□□□ -0.42
Msx1P13297 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Msx1P13297 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Msx1P13297 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx1P13297 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx1P13297 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx1P13297 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.4□□□□□ -0.42
Msx1P13297 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx1P13297 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx1P13297 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.4□□□□□ -0.42
Msx1P13297 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.4□□□□□ -0.42
Msx1P13297 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Msx1P13297 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.4□□□□□ -0.42
Msx1P13297 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx1P13297 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx1P13297 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx1P13297 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx1P13297 Gm5687-201ENSMUST00000118252 640 ntBASIC12.4□□□□□ -0.42
Msx1P13297 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.4□□□□□ -0.42
Msx1P13297 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Msx1P13297 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Msx1P13297 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Msx1P13297 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.4□□□□□ -0.42
Msx1P13297 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Msx1P13297 Gm18935-201ENSMUST00000212692 664 ntBASIC12.4□□□□□ -0.42
Msx1P13297 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC12.4□□□□□ -0.42
Msx1P13297 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.4□□□□□ -0.42
Msx1P13297 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.4□□□□□ -0.42
Msx1P13297 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.4□□□□□ -0.42
Msx1P13297 Itm2b-204ENSMUST00000228637 783 ntBASIC12.4□□□□□ -0.42
Msx1P13297 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx1P13297 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx1P13297 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Msx1P13297 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx1P13297 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx1P13297 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Msx1P13297 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.4□□□□□ -0.42
Msx1P13297 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx1P13297 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Msx1P13297 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.4□□□□□ -0.42
Msx1P13297 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Msx1P13297 Grk6-205ENSMUST00000224653 2976 ntBASIC12.4□□□□□ -0.42
Msx1P13297 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx1P13297 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Msx1P13297 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Msx1P13297 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Msx1P13297 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Msx1P13297 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Msx1P13297 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Msx1P13297 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Msx1P13297 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Msx1P13297 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Msx1P13297 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.39□□□□□ -0.43
Msx1P13297 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Msx1P13297 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Msx1P13297 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Msx1P13297 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Msx1P13297 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.39□□□□□ -0.43
Msx1P13297 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Msx1P13297 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.39□□□□□ -0.43
Msx1P13297 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Msx1P13297 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Msx1P13297 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Msx1P13297 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.39□□□□□ -0.43
Msx1P13297 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Msx1P13297 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC12.39□□□□□ -0.43
Msx1P13297 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC12.39□□□□□ -0.43
Msx1P13297 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.39□□□□□ -0.43
Msx1P13297 Gm11793-201ENSMUST00000120433 981 ntBASIC12.39□□□□□ -0.43
Msx1P13297 Cgrrf1-203ENSMUST00000133989 873 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Msx1P13297 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.39□□□□□ -0.43
Msx1P13297 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Msx1P13297 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.39□□□□□ -0.43
Msx1P13297 Mir5132-201ENSMUST00000175166 71 ntBASIC12.39□□□□□ -0.43
Msx1P13297 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Msx1P13297 Gm38341-201ENSMUST00000195357 515 ntBASIC12.39□□□□□ -0.43
Msx1P13297 Gm43133-201ENSMUST00000197472 463 ntBASIC12.39□□□□□ -0.43
Msx1P13297 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms