Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cntn1P12960 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Cntn1P12960 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cntn1P12960 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cntn1P12960 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.43□□□□□ -0.42
Cntn1P12960 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.43□□□□□ -0.42
Cntn1P12960 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cntn1P12960 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 Gm15198-201ENSMUST00000117283 177 ntBASIC12.43□□□□□ -0.42
Cntn1P12960 Gm11591-201ENSMUST00000120063 702 ntBASIC12.43□□□□□ -0.42
Cntn1P12960 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.43□□□□□ -0.42
Cntn1P12960 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 Gm16379-201ENSMUST00000161469 348 ntBASIC12.43□□□□□ -0.42
Cntn1P12960 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 Gm8762-201ENSMUST00000193486 339 ntBASIC12.43□□□□□ -0.42
Cntn1P12960 Gm43133-201ENSMUST00000197472 463 ntBASIC12.43□□□□□ -0.42
Cntn1P12960 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.43□□□□□ -0.42
Cntn1P12960 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Cntn1P12960 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.43□□□□□ -0.42
Cntn1P12960 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cntn1P12960 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Cntn1P12960 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Cntn1P12960 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Cntn1P12960 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.43□□□□□ -0.42
Cntn1P12960 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cntn1P12960 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cntn1P12960 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn1P12960 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn1P12960 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn1P12960 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Cntn1P12960 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.42□□□□□ -0.42
Cntn1P12960 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn1P12960 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn1P12960 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn1P12960 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn1P12960 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn1P12960 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn1P12960 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn1P12960 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn1P12960 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn1P12960 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn1P12960 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Cntn1P12960 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.42□□□□□ -0.42
Cntn1P12960 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.42□□□□□ -0.42
Cntn1P12960 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.42□□□□□ -0.42
Cntn1P12960 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.42□□□□□ -0.42
Cntn1P12960 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.42□□□□□ -0.42
Cntn1P12960 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.42□□□□□ -0.42
Cntn1P12960 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.42□□□□□ -0.42
Cntn1P12960 Gm19931-201ENSMUST00000198920 368 ntBASIC12.42□□□□□ -0.42
Cntn1P12960 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn1P12960 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn1P12960 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.42□□□□□ -0.42
Cntn1P12960 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn1P12960 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.42□□□□□ -0.42
Cntn1P12960 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Cntn1P12960 Olfr582-201ENSMUST00000098212 960 ntBASIC12.42□□□□□ -0.42
Cntn1P12960 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Cntn1P12960 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cntn1P12960 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn1P12960 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn1P12960 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn1P12960 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn1P12960 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn1P12960 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Cntn1P12960 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn1P12960 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn1P12960 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn1P12960 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn1P12960 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn1P12960 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cntn1P12960 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cntn1P12960 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms