Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RaraP11416 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14□□□□□ -0.17
RaraP11416 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14□□□□□ -0.17
RaraP11416 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RaraP11416 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RaraP11416 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
RaraP11416 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RaraP11416 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14□□□□□ -0.17
RaraP11416 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14□□□□□ -0.17
RaraP11416 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RaraP11416 Gm37391-201ENSMUST00000194891 2318 ntBASIC14□□□□□ -0.17
RaraP11416 Adra1a-206ENSMUST00000225182 2337 ntBASIC14□□□□□ -0.17
RaraP11416 Gm16202-201ENSMUST00000117532 544 ntBASIC14□□□□□ -0.17
RaraP11416 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14□□□□□ -0.17
RaraP11416 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RaraP11416 Gm37917-201ENSMUST00000194711 392 ntBASIC14□□□□□ -0.17
RaraP11416 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RaraP11416 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RaraP11416 Gm2423-201ENSMUST00000074863 733 ntBASIC14□□□□□ -0.17
RaraP11416 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14□□□□□ -0.17
RaraP11416 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14□□□□□ -0.17
RaraP11416 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RaraP11416 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
RaraP11416 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14□□□□□ -0.17
RaraP11416 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14□□□□□ -0.17
RaraP11416 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RaraP11416 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RaraP11416 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RaraP11416 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RaraP11416 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RaraP11416 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
RaraP11416 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RaraP11416 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RaraP11416 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RaraP11416 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.99□□□□□ -0.17
RaraP11416 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RaraP11416 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RaraP11416 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RaraP11416 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RaraP11416 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RaraP11416 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RaraP11416 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RaraP11416 Gm12859-201ENSMUST00000117834 427 ntBASIC13.99□□□□□ -0.17
RaraP11416 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RaraP11416 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
RaraP11416 Gm25007-201ENSMUST00000083808 133 ntBASIC13.99□□□□□ -0.17
RaraP11416 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.99□□□□□ -0.17
RaraP11416 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RaraP11416 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RaraP11416 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RaraP11416 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RaraP11416 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RaraP11416 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RaraP11416 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RaraP11416 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RaraP11416 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RaraP11416 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RaraP11416 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RaraP11416 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RaraP11416 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RaraP11416 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RaraP11416 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RaraP11416 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RaraP11416 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RaraP11416 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RaraP11416 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RaraP11416 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
RaraP11416 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RaraP11416 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RaraP11416 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.98□□□□□ -0.17
RaraP11416 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RaraP11416 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RaraP11416 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RaraP11416 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RaraP11416 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RaraP11416 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.98□□□□□ -0.17
RaraP11416 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RaraP11416 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RaraP11416 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RaraP11416 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RaraP11416 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RaraP11416 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RaraP11416 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RaraP11416 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RaraP11416 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.97□□□□□ -0.17
RaraP11416 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RaraP11416 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RaraP11416 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RaraP11416 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RaraP11416 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RaraP11416 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RaraP11416 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RaraP11416 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
RaraP11416 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RaraP11416 Gm6152-201ENSMUST00000151704 340 ntBASIC13.97□□□□□ -0.17
RaraP11416 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.97□□□□□ -0.17
RaraP11416 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RaraP11416 Auts2-212ENSMUST00000178555 309 ntBASIC13.97□□□□□ -0.17
RaraP11416 Gm2495-201ENSMUST00000191160 466 ntBASIC13.97□□□□□ -0.17
RaraP11416 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms