Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl3P10855 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Ccl3P10855 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.4□□□□□ -0.58
Ccl3P10855 Gm13996-201ENSMUST00000118456 430 ntBASIC11.4□□□□□ -0.58
Ccl3P10855 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.4□□□□□ -0.58
Ccl3P10855 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl3P10855 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl3P10855 Gm27023-201ENSMUST00000182372 285 ntBASIC11.4□□□□□ -0.58
Ccl3P10855 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.4□□□□□ -0.58
Ccl3P10855 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.4□□□□□ -0.58
Ccl3P10855 Gm45224-201ENSMUST00000208203 414 ntBASIC11.4□□□□□ -0.58
Ccl3P10855 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.4□□□□□ -0.58
Ccl3P10855 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl3P10855 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl3P10855 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Ccl3P10855 Gm10312-201ENSMUST00000078515 489 ntBASIC11.4□□□□□ -0.58
Ccl3P10855 Mir339-201ENSMUST00000083659 96 ntBASIC11.4□□□□□ -0.58
Ccl3P10855 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl3P10855 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Ccl3P10855 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl3P10855 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl3P10855 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ccl3P10855 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl3P10855 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ccl3P10855 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ccl3P10855 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.4□□□□□ -0.59
Ccl3P10855 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ccl3P10855 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Ccl3P10855 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ccl3P10855 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Ccl3P10855 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl3P10855 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl3P10855 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl3P10855 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl3P10855 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl3P10855 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl3P10855 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl3P10855 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl3P10855 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Ccl3P10855 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl3P10855 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl3P10855 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl3P10855 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Ccl3P10855 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.39□□□□□ -0.59
Ccl3P10855 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.39□□□□□ -0.59
Ccl3P10855 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Ccl3P10855 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl3P10855 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.39□□□□□ -0.59
Ccl3P10855 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.39□□□□□ -0.59
Ccl3P10855 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl3P10855 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl3P10855 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.39□□□□□ -0.59
Ccl3P10855 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Ccl3P10855 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl3P10855 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.39□□□□□ -0.59
Ccl3P10855 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Ccl3P10855 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.39□□□□□ -0.59
Ccl3P10855 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl3P10855 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl3P10855 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl3P10855 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl3P10855 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl3P10855 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl3P10855 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl3P10855 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl3P10855 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl3P10855 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl3P10855 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl3P10855 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.38□□□□□ -0.59
Ccl3P10855 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Ccl3P10855 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.38□□□□□ -0.59
Ccl3P10855 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 Gm23200-201ENSMUST00000104379 132 ntBASIC11.38□□□□□ -0.59
Ccl3P10855 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 Gm13296-201ENSMUST00000117854 997 ntBASIC11.38□□□□□ -0.59
Ccl3P10855 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.38□□□□□ -0.59
Ccl3P10855 Gm9083-201ENSMUST00000120423 819 ntBASIC11.38□□□□□ -0.59
Ccl3P10855 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.38□□□□□ -0.59
Ccl3P10855 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.38□□□□□ -0.59
Ccl3P10855 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 Gm43947-201ENSMUST00000203019 959 ntBASIC11.38□□□□□ -0.59
Ccl3P10855 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.38□□□□□ -0.59
Ccl3P10855 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.38□□□□□ -0.59
Ccl3P10855 Gm8913-201ENSMUST00000209491 641 ntBASIC11.38□□□□□ -0.59
Ccl3P10855 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ccl3P10855 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 Gzmn-202ENSMUST00000225535 989 ntBASIC11.38□□□□□ -0.59
Ccl3P10855 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccl3P10855 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms