Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ApoeP08226 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ApoeP08226 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ApoeP08226 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ApoeP08226 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ApoeP08226 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
ApoeP08226 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ApoeP08226 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
ApoeP08226 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
ApoeP08226 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.26□□□□□ -0.45
ApoeP08226 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ApoeP08226 Gm27525-201ENSMUST00000184465 107 ntBASIC12.26□□□□□ -0.45
ApoeP08226 Gm29608-201ENSMUST00000190444 463 ntBASIC12.26□□□□□ -0.45
ApoeP08226 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.26□□□□□ -0.45
ApoeP08226 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ApoeP08226 Daam2-202ENSMUST00000224595 1926 ntBASIC12.26□□□□□ -0.45
ApoeP08226 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ApoeP08226 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ApoeP08226 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ApoeP08226 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ApoeP08226 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ApoeP08226 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ApoeP08226 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ApoeP08226 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.26□□□□□ -0.45
ApoeP08226 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.26□□□□□ -0.45
ApoeP08226 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
ApoeP08226 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ApoeP08226 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ApoeP08226 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ApoeP08226 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ApoeP08226 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ApoeP08226 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
ApoeP08226 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
ApoeP08226 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ApoeP08226 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ApoeP08226 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ApoeP08226 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ApoeP08226 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
ApoeP08226 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ApoeP08226 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
ApoeP08226 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ApoeP08226 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.25□□□□□ -0.45
ApoeP08226 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ApoeP08226 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ApoeP08226 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ApoeP08226 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ApoeP08226 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
ApoeP08226 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
ApoeP08226 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ApoeP08226 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ApoeP08226 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.25□□□□□ -0.45
ApoeP08226 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ApoeP08226 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.25□□□□□ -0.45
ApoeP08226 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.25□□□□□ -0.45
ApoeP08226 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.25□□□□□ -0.45
ApoeP08226 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.25□□□□□ -0.45
ApoeP08226 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
ApoeP08226 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
ApoeP08226 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.25□□□□□ -0.45
ApoeP08226 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ApoeP08226 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
ApoeP08226 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
ApoeP08226 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ApoeP08226 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ApoeP08226 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ApoeP08226 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ApoeP08226 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ApoeP08226 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ApoeP08226 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ApoeP08226 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
ApoeP08226 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ApoeP08226 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ApoeP08226 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ApoeP08226 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ApoeP08226 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.25□□□□□ -0.45
ApoeP08226 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ApoeP08226 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ApoeP08226 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ApoeP08226 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ApoeP08226 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ApoeP08226 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
ApoeP08226 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ApoeP08226 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ApoeP08226 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ApoeP08226 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ApoeP08226 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.24□□□□□ -0.45
ApoeP08226 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.24□□□□□ -0.45
ApoeP08226 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ApoeP08226 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ApoeP08226 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ApoeP08226 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
ApoeP08226 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ApoeP08226 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ApoeP08226 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ApoeP08226 Gm6447-201ENSMUST00000118905 835 ntBASIC12.24□□□□□ -0.45
ApoeP08226 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
ApoeP08226 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ApoeP08226 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ApoeP08226 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
ApoeP08226 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms