Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P04224 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
P04224 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04224 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04224 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04224 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
P04224 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04224 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04224 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04224 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04224 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
P04224 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04224 Gm5648-201ENSMUST00000122244 1587 ntBASIC11.37□□□□□ -0.59
P04224 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.37□□□□□ -0.59
P04224 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04224 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04224 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.37□□□□□ -0.59
P04224 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04224 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.37□□□□□ -0.59
P04224 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.37□□□□□ -0.59
P04224 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
P04224 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04224 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04224 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04224 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04224 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
P04224 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04224 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04224 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04224 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04224 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.37□□□□□ -0.59
P04224 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04224 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04224 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC11.37□□□□□ -0.59
P04224 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04224 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04224 Gm27525-201ENSMUST00000184465 107 ntBASIC11.37□□□□□ -0.59
P04224 Gm43474-201ENSMUST00000196415 774 ntBASIC11.37□□□□□ -0.59
P04224 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
P04224 AW822252-206ENSMUST00000208904 237 ntBASIC11.37□□□□□ -0.59
P04224 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04224 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04224 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.37□□□□□ -0.59
P04224 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
P04224 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04224 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04224 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
P04224 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04224 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
P04224 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04224 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
P04224 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
P04224 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
P04224 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.36□□□□□ -0.59
P04224 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04224 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04224 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
P04224 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04224 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04224 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
P04224 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04224 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04224 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04224 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
P04224 Mir874-201ENSMUST00000104769 76 ntBASIC11.36□□□□□ -0.59
P04224 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC11.36□□□□□ -0.59
P04224 Gm8410-201ENSMUST00000117225 605 ntBASIC11.36□□□□□ -0.59
P04224 Gm4995-201ENSMUST00000117247 432 ntBASIC11.36□□□□□ -0.59
P04224 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04224 Mir1897-201ENSMUST00000122581 272 ntBASIC11.36□□□□□ -0.59
P04224 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.36□□□□□ -0.59
P04224 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.36□□□□□ -0.59
P04224 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
P04224 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04224 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.36□□□□□ -0.59
P04224 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
P04224 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
P04224 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.36□□□□□ -0.59
P04224 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.36□□□□□ -0.59
P04224 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.36□□□□□ -0.59
P04224 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.36□□□□□ -0.59
P04224 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04224 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
P04224 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04224 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.36□□□□□ -0.59
P04224 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.36□□□□□ -0.59
P04224 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.36□□□□□ -0.59
P04224 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
P04224 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
P04224 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04224 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04224 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
P04224 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
P04224 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04224 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04224 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04224 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04224 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04224 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
P04224 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms