Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
P01788 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01788 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01788 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01788 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
P01788 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
P01788 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01788 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01788 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01788 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01788 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.23□□□□□ -0.77
P01788 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
P01788 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
P01788 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
P01788 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
P01788 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.22□□□□□ -0.77
P01788 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
P01788 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.22□□□□□ -0.77
P01788 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.22□□□□□ -0.77
P01788 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
P01788 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC10.22□□□□□ -0.77
P01788 Gm15487-201ENSMUST00000122373 465 ntBASIC10.22□□□□□ -0.77
P01788 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.22□□□□□ -0.77
P01788 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
P01788 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Gm27306-201ENSMUST00000183970 107 ntBASIC10.22□□□□□ -0.77
P01788 Gm37171-201ENSMUST00000192636 1185 ntBASIC10.22□□□□□ -0.77
P01788 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Gm9797-201ENSMUST00000052902 613 ntBASIC10.22□□□□□ -0.77
P01788 Gm20445-201ENSMUST00000061905 565 ntBASIC10.22□□□□□ -0.77
P01788 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
P01788 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
P01788 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P01788 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
P01788 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P01788 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
P01788 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
P01788 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
P01788 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
P01788 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P01788 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
P01788 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
P01788 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
P01788 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
P01788 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.21□□□□□ -0.77
P01788 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
P01788 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
P01788 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
P01788 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
P01788 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.21□□□□□ -0.77
P01788 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.21□□□□□ -0.77
P01788 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P01788 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC10.21□□□□□ -0.77
P01788 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.21□□□□□ -0.77
P01788 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC10.21□□□□□ -0.77
P01788 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC10.21□□□□□ -0.77
P01788 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P01788 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
P01788 Gm42550-201ENSMUST00000201553 960 ntBASIC10.21□□□□□ -0.77
P01788 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC10.21□□□□□ -0.77
P01788 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.21□□□□□ -0.77
P01788 Gm26315-201ENSMUST00000083890 321 ntBASIC10.21□□□□□ -0.77
P01788 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
P01788 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
P01788 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
P01788 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
P01788 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
P01788 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
P01788 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
P01788 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms