Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cops4O88544 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cops4O88544 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cops4O88544 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cops4O88544 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cops4O88544 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cops4O88544 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cops4O88544 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cops4O88544 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cops4O88544 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Cops4O88544 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.96□□□□□ -0.49
Cops4O88544 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cops4O88544 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cops4O88544 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Cops4O88544 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.96□□□□□ -0.49
Cops4O88544 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.96□□□□□ -0.49
Cops4O88544 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.96□□□□□ -0.49
Cops4O88544 Gm43703-201ENSMUST00000200523 763 ntBASIC11.96□□□□□ -0.49
Cops4O88544 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cops4O88544 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cops4O88544 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cops4O88544 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.96□□□□□ -0.49
Cops4O88544 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cops4O88544 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Cops4O88544 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cops4O88544 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Cops4O88544 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Cops4O88544 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cops4O88544 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cops4O88544 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Cops4O88544 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
Cops4O88544 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.95□□□□□ -0.5
Cops4O88544 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cops4O88544 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.95□□□□□ -0.5
Cops4O88544 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.95□□□□□ -0.5
Cops4O88544 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.95□□□□□ -0.5
Cops4O88544 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cops4O88544 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.95□□□□□ -0.5
Cops4O88544 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Cops4O88544 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Cops4O88544 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.95□□□□□ -0.5
Cops4O88544 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.95□□□□□ -0.5
Cops4O88544 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Cops4O88544 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.95□□□□□ -0.5
Cops4O88544 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cops4O88544 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cops4O88544 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Cops4O88544 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cops4O88544 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.95□□□□□ -0.5
Cops4O88544 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cops4O88544 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.95□□□□□ -0.5
Cops4O88544 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.95□□□□□ -0.5
Cops4O88544 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.95□□□□□ -0.5
Cops4O88544 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.95□□□□□ -0.5
Cops4O88544 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.95□□□□□ -0.5
Cops4O88544 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Cops4O88544 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Cops4O88544 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cops4O88544 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cops4O88544 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cops4O88544 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cops4O88544 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cops4O88544 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cops4O88544 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cops4O88544 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cops4O88544 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms