Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Nr1i3O35627 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.91□□□□□ -0.18
Nr1i3O35627 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Nr1i3O35627 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Nr1i3O35627 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1i3O35627 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.91□□□□□ -0.18
Nr1i3O35627 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.91□□□□□ -0.18
Nr1i3O35627 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Nr1i3O35627 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1i3O35627 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.91□□□□□ -0.18
Nr1i3O35627 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1i3O35627 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1i3O35627 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1i3O35627 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.91□□□□□ -0.18
Nr1i3O35627 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1i3O35627 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1i3O35627 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1i3O35627 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1i3O35627 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1i3O35627 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.9□□□□□ -0.18
Nr1i3O35627 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1i3O35627 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1i3O35627 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.9□□□□□ -0.18
Nr1i3O35627 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.9□□□□□ -0.18
Nr1i3O35627 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1i3O35627 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Nr1i3O35627 Gm27701-201ENSMUST00000184498 110 ntBASIC13.9□□□□□ -0.18
Nr1i3O35627 Gm44124-201ENSMUST00000204159 472 ntBASIC13.9□□□□□ -0.18
Nr1i3O35627 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.9□□□□□ -0.18
Nr1i3O35627 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.9□□□□□ -0.18
Nr1i3O35627 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1i3O35627 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1i3O35627 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1i3O35627 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Nr1i3O35627 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1i3O35627 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1i3O35627 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.9□□□□□ -0.18
Nr1i3O35627 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1i3O35627 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1i3O35627 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1i3O35627 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1i3O35627 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Nr1i3O35627 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1i3O35627 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.9□□□□□ -0.18
Nr1i3O35627 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1i3O35627 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1i3O35627 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1i3O35627 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1i3O35627 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Nr1i3O35627 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nr1i3O35627 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1i3O35627 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.89□□□□□ -0.19
Nr1i3O35627 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Nr1i3O35627 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nr1i3O35627 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nr1i3O35627 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1i3O35627 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1i3O35627 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1i3O35627 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Nr1i3O35627 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.89□□□□□ -0.19
Nr1i3O35627 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1i3O35627 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1i3O35627 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1i3O35627 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1i3O35627 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nr1i3O35627 Gm11618-201ENSMUST00000117946 267 ntBASIC13.89□□□□□ -0.19
Nr1i3O35627 Gm13612-201ENSMUST00000119276 390 ntBASIC13.89□□□□□ -0.19
Nr1i3O35627 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.89□□□□□ -0.19
Nr1i3O35627 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Nr1i3O35627 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.89□□□□□ -0.19
Nr1i3O35627 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.89□□□□□ -0.19
Nr1i3O35627 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1i3O35627 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.89□□□□□ -0.19
Nr1i3O35627 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1i3O35627 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1i3O35627 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Nr1i3O35627 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nr1i3O35627 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1i3O35627 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.89□□□□□ -0.19
Nr1i3O35627 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.89□□□□□ -0.19
Nr1i3O35627 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Nr1i3O35627 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1i3O35627 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1i3O35627 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1i3O35627 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1i3O35627 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1i3O35627 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1i3O35627 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1i3O35627 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1i3O35627 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1i3O35627 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1i3O35627 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.89□□□□□ -0.19
Nr1i3O35627 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nr1i3O35627 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1i3O35627 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1i3O35627 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1i3O35627 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1i3O35627 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nr1i3O35627 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nr1i3O35627 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms