Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim55G3X8Y1 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim55G3X8Y1 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim55G3X8Y1 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim55G3X8Y1 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Trim55G3X8Y1 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim55G3X8Y1 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim55G3X8Y1 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim55G3X8Y1 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.29□□□□□ -0.28
Trim55G3X8Y1 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim55G3X8Y1 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.29□□□□□ -0.28
Trim55G3X8Y1 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim55G3X8Y1 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.29□□□□□ -0.28
Trim55G3X8Y1 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim55G3X8Y1 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim55G3X8Y1 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim55G3X8Y1 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim55G3X8Y1 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim55G3X8Y1 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim55G3X8Y1 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trim55G3X8Y1 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim55G3X8Y1 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim55G3X8Y1 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim55G3X8Y1 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim55G3X8Y1 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.29□□□□□ -0.28
Trim55G3X8Y1 AC124433.1-202ENSMUST00000224762 1535 ntBASIC13.29□□□□□ -0.28
Trim55G3X8Y1 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.28□□□□□ -0.28
Trim55G3X8Y1 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim55G3X8Y1 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim55G3X8Y1 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim55G3X8Y1 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim55G3X8Y1 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim55G3X8Y1 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim55G3X8Y1 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim55G3X8Y1 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim55G3X8Y1 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.28□□□□□ -0.28
Trim55G3X8Y1 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.28□□□□□ -0.28
Trim55G3X8Y1 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim55G3X8Y1 Gm4899-201ENSMUST00000178708 719 ntBASIC13.28□□□□□ -0.28
Trim55G3X8Y1 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.28□□□□□ -0.28
Trim55G3X8Y1 Gm43575-201ENSMUST00000196420 516 ntBASIC13.28□□□□□ -0.28
Trim55G3X8Y1 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim55G3X8Y1 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.28□□□□□ -0.28
Trim55G3X8Y1 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim55G3X8Y1 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trim55G3X8Y1 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim55G3X8Y1 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim55G3X8Y1 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.28□□□□□ -0.28
Trim55G3X8Y1 Gm10154-201ENSMUST00000084445 354 ntBASIC13.28□□□□□ -0.28
Trim55G3X8Y1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim55G3X8Y1 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trim55G3X8Y1 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim55G3X8Y1 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim55G3X8Y1 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim55G3X8Y1 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Trim55G3X8Y1 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim55G3X8Y1 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim55G3X8Y1 Gm10686-201ENSMUST00000215389 3247 ntBASIC13.28□□□□□ -0.28
Trim55G3X8Y1 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trim55G3X8Y1 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim55G3X8Y1 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim55G3X8Y1 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim55G3X8Y1 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trim55G3X8Y1 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim55G3X8Y1 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim55G3X8Y1 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim55G3X8Y1 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim55G3X8Y1 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim55G3X8Y1 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim55G3X8Y1 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC13.27□□□□□ -0.28
Trim55G3X8Y1 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim55G3X8Y1 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim55G3X8Y1 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim55G3X8Y1 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim55G3X8Y1 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.27□□□□□ -0.29
Trim55G3X8Y1 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trim55G3X8Y1 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim55G3X8Y1 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim55G3X8Y1 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms