Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh9F8VPK8 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh9F8VPK8 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh9F8VPK8 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh9F8VPK8 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh9F8VPK8 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh9F8VPK8 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh9F8VPK8 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh9F8VPK8 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh9F8VPK8 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
Pcdh9F8VPK8 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh9F8VPK8 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh9F8VPK8 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh9F8VPK8 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.28
Pcdh9F8VPK8 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh9F8VPK8 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh9F8VPK8 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh9F8VPK8 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Pcdh9F8VPK8 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh9F8VPK8 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh9F8VPK8 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh9F8VPK8 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh9F8VPK8 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdh9F8VPK8 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh9F8VPK8 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.27□□□□□ -0.29
Pcdh9F8VPK8 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh9F8VPK8 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdh9F8VPK8 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh9F8VPK8 Gm45668-201ENSMUST00000211271 493 ntBASIC13.27□□□□□ -0.29
Pcdh9F8VPK8 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh9F8VPK8 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh9F8VPK8 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh9F8VPK8 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh9F8VPK8 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh9F8VPK8 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh9F8VPK8 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh9F8VPK8 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh9F8VPK8 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.27□□□□□ -0.29
Pcdh9F8VPK8 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Pcdh9F8VPK8 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh9F8VPK8 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh9F8VPK8 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh9F8VPK8 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh9F8VPK8 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh9F8VPK8 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh9F8VPK8 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh9F8VPK8 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh9F8VPK8 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh9F8VPK8 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh9F8VPK8 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.26□□□□□ -0.29
Pcdh9F8VPK8 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh9F8VPK8 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh9F8VPK8 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdh9F8VPK8 Gm15429-201ENSMUST00000151268 798 ntBASIC13.26□□□□□ -0.29
Pcdh9F8VPK8 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdh9F8VPK8 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdh9F8VPK8 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh9F8VPK8 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.26□□□□□ -0.29
Pcdh9F8VPK8 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdh9F8VPK8 Gm6458-201ENSMUST00000211573 635 ntBASIC13.26□□□□□ -0.29
Pcdh9F8VPK8 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdh9F8VPK8 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.26□□□□□ -0.29
Pcdh9F8VPK8 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdh9F8VPK8 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh9F8VPK8 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh9F8VPK8 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh9F8VPK8 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh9F8VPK8 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdh9F8VPK8 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh9F8VPK8 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh9F8VPK8 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms