Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.84□□□□□ -0.67
Usf3B2RUQ2 AC122314.1-201ENSMUST00000223056 2239 ntBASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Ankra2-208ENSMUST00000226100 1476 ntBASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Gm27682-201ENSMUST00000183930 110 ntBASIC10.84□□□□□ -0.67
Usf3B2RUQ2 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Gm43818-201ENSMUST00000200605 466 ntBASIC10.84□□□□□ -0.67
Usf3B2RUQ2 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Usf3B2RUQ2 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usf3B2RUQ2 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usf3B2RUQ2 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usf3B2RUQ2 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usf3B2RUQ2 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usf3B2RUQ2 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usf3B2RUQ2 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Usf3B2RUQ2 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Usf3B2RUQ2 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Usf3B2RUQ2 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usf3B2RUQ2 Gm38341-201ENSMUST00000195357 515 ntBASIC10.83□□□□□ -0.68
Usf3B2RUQ2 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usf3B2RUQ2 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usf3B2RUQ2 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usf3B2RUQ2 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Usf3B2RUQ2 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usf3B2RUQ2 Gm5939-201ENSMUST00000119613 2874 ntBASIC10.83□□□□□ -0.68
Usf3B2RUQ2 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usf3B2RUQ2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usf3B2RUQ2 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.83□□□□□ -0.68
Usf3B2RUQ2 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usf3B2RUQ2 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.83□□□□□ -0.68
Usf3B2RUQ2 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usf3B2RUQ2 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usf3B2RUQ2 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Usf3B2RUQ2 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Usf3B2RUQ2 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Gm1335-201ENSMUST00000121653 386 ntBASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Gm27341-201ENSMUST00000183570 106 ntBASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Gm45865-201ENSMUST00000211815 945 ntBASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Usf3B2RUQ2 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Usf3B2RUQ2 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Gm10156-201ENSMUST00000122364 462 ntBASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.82□□□□□ -0.68
Usf3B2RUQ2 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms