Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc194A0A140LIT1 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc194A0A140LIT1 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc194A0A140LIT1 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccdc194A0A140LIT1 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.9□□□□□ -0.34
Ccdc194A0A140LIT1 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc194A0A140LIT1 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccdc194A0A140LIT1 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.9□□□□□ -0.34
Ccdc194A0A140LIT1 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.9□□□□□ -0.34
Ccdc194A0A140LIT1 Itm2b-204ENSMUST00000228637 783 ntBASIC12.9□□□□□ -0.34
Ccdc194A0A140LIT1 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc194A0A140LIT1 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc194A0A140LIT1 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc194A0A140LIT1 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc194A0A140LIT1 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc194A0A140LIT1 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc194A0A140LIT1 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc194A0A140LIT1 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc194A0A140LIT1 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc194A0A140LIT1 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc194A0A140LIT1 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc194A0A140LIT1 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc194A0A140LIT1 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc194A0A140LIT1 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc194A0A140LIT1 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ccdc194A0A140LIT1 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc194A0A140LIT1 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Gm16202-201ENSMUST00000117532 544 ntBASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Gm37917-201ENSMUST00000194711 392 ntBASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.88□□□□□ -0.35
Ccdc194A0A140LIT1 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc194A0A140LIT1 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Ccdc194A0A140LIT1 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc194A0A140LIT1 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc194A0A140LIT1 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc194A0A140LIT1 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc194A0A140LIT1 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms