Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb3S4R1G7 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb3S4R1G7 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb3S4R1G7 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb3S4R1G7 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb3S4R1G7 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb3S4R1G7 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb3S4R1G7 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb3S4R1G7 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
H2afb3S4R1G7 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb3S4R1G7 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.71□□□□□ -0.53
H2afb3S4R1G7 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb3S4R1G7 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
H2afb3S4R1G7 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.71□□□□□ -0.53
H2afb3S4R1G7 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.71□□□□□ -0.53
H2afb3S4R1G7 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb3S4R1G7 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
H2afb3S4R1G7 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb3S4R1G7 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb3S4R1G7 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afb3S4R1G7 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
H2afb3S4R1G7 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
H2afb3S4R1G7 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
H2afb3S4R1G7 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
H2afb3S4R1G7 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
H2afb3S4R1G7 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.71□□□□□ -0.54
H2afb3S4R1G7 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
H2afb3S4R1G7 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
H2afb3S4R1G7 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
H2afb3S4R1G7 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
H2afb3S4R1G7 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
H2afb3S4R1G7 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
H2afb3S4R1G7 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Gm14057-201ENSMUST00000120631 482 ntBASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Gm15321-201ENSMUST00000121290 288 ntBASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.7□□□□□ -0.54
H2afb3S4R1G7 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Gm26315-201ENSMUST00000083890 321 ntBASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afb3S4R1G7 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms