Protein–RNA interactions for Protein: Q9QXD8

Limd1, LIM domain-containing protein 1, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limd1Q9QXD8 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.31□□□□□ -0.12
Limd1Q9QXD8 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Limd1Q9QXD8 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limd1Q9QXD8 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Limd1Q9QXD8 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limd1Q9QXD8 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limd1Q9QXD8 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limd1Q9QXD8 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limd1Q9QXD8 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limd1Q9QXD8 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Gm23270-201ENSMUST00000104055 131 ntBASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Mir874-201ENSMUST00000104769 76 ntBASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Gm13875-201ENSMUST00000120162 282 ntBASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Gm12997-201ENSMUST00000120207 640 ntBASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Gm16570-201ENSMUST00000161951 436 ntBASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Gm23363-201ENSMUST00000175024 79 ntBASIC14.3□□□□□ -0.12
Limd1Q9QXD8 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.3□□□□□ -0.12
Limd1Q9QXD8 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.3□□□□□ -0.12
Limd1Q9QXD8 CT010486.3-201ENSMUST00000224555 811 ntBASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Gm22058-201ENSMUST00000083393 310 ntBASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limd1Q9QXD8 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limd1Q9QXD8 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limd1Q9QXD8 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Gm25214-201ENSMUST00000104573 129 ntBASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limd1Q9QXD8 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Limd1Q9QXD8 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Limd1Q9QXD8 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Limd1Q9QXD8 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.28□□□□□ -0.12
Limd1Q9QXD8 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Limd1Q9QXD8 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Limd1Q9QXD8 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.28□□□□□ -0.12
Limd1Q9QXD8 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Limd1Q9QXD8 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Limd1Q9QXD8 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.28□□□□□ -0.12
Limd1Q9QXD8 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.28□□□□□ -0.12
Limd1Q9QXD8 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Limd1Q9QXD8 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.28□□□□□ -0.12
Limd1Q9QXD8 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms