Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Gm26315-201ENSMUST00000083890 321 ntBASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a2Q9JLR1 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 Gm27701-201ENSMUST00000184498 110 ntBASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 Gm2495-201ENSMUST00000191160 466 ntBASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a2Q9JLR1 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sec61a2Q9JLR1 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sec61a2Q9JLR1 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Sec61a2Q9JLR1 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sec61a2Q9JLR1 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sec61a2Q9JLR1 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Sec61a2Q9JLR1 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sec61a2Q9JLR1 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Sec61a2Q9JLR1 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sec61a2Q9JLR1 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Sec61a2Q9JLR1 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sec61a2Q9JLR1 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sec61a2Q9JLR1 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a2Q9JLR1 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms