Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Gm11594-201ENSMUST00000122313 162 ntBASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Gm27397-201ENSMUST00000184997 107 ntBASIC12.45□□□□□ -0.42
Ube4bQ9ES00 AA619741-201ENSMUST00000195095 646 ntBASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Gm2756-201ENSMUST00000195851 400 ntBASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Gm2213-201ENSMUST00000197485 688 ntBASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Gm43125-201ENSMUST00000201724 730 ntBASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ube4bQ9ES00 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Gm6222-201ENSMUST00000120787 396 ntBASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ube4bQ9ES00 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms