Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lima1Q9ERG0 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lima1Q9ERG0 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lima1Q9ERG0 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lima1Q9ERG0 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.81□□□□□ -0.36
Lima1Q9ERG0 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lima1Q9ERG0 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lima1Q9ERG0 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lima1Q9ERG0 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lima1Q9ERG0 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lima1Q9ERG0 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.81□□□□□ -0.36
Lima1Q9ERG0 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lima1Q9ERG0 Gm14057-201ENSMUST00000120631 482 ntBASIC12.81□□□□□ -0.36
Lima1Q9ERG0 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.81□□□□□ -0.36
Lima1Q9ERG0 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lima1Q9ERG0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lima1Q9ERG0 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Lima1Q9ERG0 Gm5279-201ENSMUST00000199575 745 ntBASIC12.81□□□□□ -0.36
Lima1Q9ERG0 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.81□□□□□ -0.36
Lima1Q9ERG0 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.81□□□□□ -0.36
Lima1Q9ERG0 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lima1Q9ERG0 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lima1Q9ERG0 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lima1Q9ERG0 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Lima1Q9ERG0 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lima1Q9ERG0 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Lima1Q9ERG0 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.81□□□□□ -0.36
Lima1Q9ERG0 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.81□□□□□ -0.36
Lima1Q9ERG0 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lima1Q9ERG0 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lima1Q9ERG0 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lima1Q9ERG0 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.8□□□□□ -0.36
Lima1Q9ERG0 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Auts2-212ENSMUST00000178555 309 ntBASIC12.8□□□□□ -0.36
Lima1Q9ERG0 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lima1Q9ERG0 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Lima1Q9ERG0 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lima1Q9ERG0 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lima1Q9ERG0 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lima1Q9ERG0 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lima1Q9ERG0 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lima1Q9ERG0 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.79□□□□□ -0.36
Lima1Q9ERG0 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.79□□□□□ -0.36
Lima1Q9ERG0 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lima1Q9ERG0 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Lima1Q9ERG0 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Lima1Q9ERG0 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Lima1Q9ERG0 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lima1Q9ERG0 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lima1Q9ERG0 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lima1Q9ERG0 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lima1Q9ERG0 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lima1Q9ERG0 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Lima1Q9ERG0 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lima1Q9ERG0 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lima1Q9ERG0 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lima1Q9ERG0 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms