Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Chmp2aQ9DB34 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.55□□□□□ -0.24
Chmp2aQ9DB34 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2aQ9DB34 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2aQ9DB34 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2aQ9DB34 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Chmp2aQ9DB34 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2aQ9DB34 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2aQ9DB34 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2aQ9DB34 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2aQ9DB34 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2aQ9DB34 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2aQ9DB34 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2aQ9DB34 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2aQ9DB34 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2aQ9DB34 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Chmp2aQ9DB34 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2aQ9DB34 Gm13123-201ENSMUST00000122173 492 ntBASIC13.55□□□□□ -0.24
Chmp2aQ9DB34 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Chmp2aQ9DB34 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.55□□□□□ -0.24
Chmp2aQ9DB34 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2aQ9DB34 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2aQ9DB34 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.55□□□□□ -0.24
Chmp2aQ9DB34 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2aQ9DB34 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2aQ9DB34 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2aQ9DB34 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2aQ9DB34 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2aQ9DB34 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2aQ9DB34 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Chmp2aQ9DB34 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2aQ9DB34 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Chmp2aQ9DB34 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.54□□□□□ -0.24
Chmp2aQ9DB34 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2aQ9DB34 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.54□□□□□ -0.24
Chmp2aQ9DB34 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2aQ9DB34 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2aQ9DB34 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Chmp2aQ9DB34 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2aQ9DB34 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.54□□□□□ -0.24
Chmp2aQ9DB34 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.54□□□□□ -0.24
Chmp2aQ9DB34 Gm10146-201ENSMUST00000072739 309 ntBASIC13.54□□□□□ -0.24
Chmp2aQ9DB34 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2aQ9DB34 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2aQ9DB34 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2aQ9DB34 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2aQ9DB34 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Chmp2aQ9DB34 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2aQ9DB34 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2aQ9DB34 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2aQ9DB34 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Chmp2aQ9DB34 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2aQ9DB34 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp2aQ9DB34 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Chmp2aQ9DB34 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.54□□□□□ -0.24
Chmp2aQ9DB34 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 Gm40466-201ENSMUST00000212174 422 ntBASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2aQ9DB34 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
Chmp2aQ9DB34 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp2aQ9DB34 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp2aQ9DB34 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp2aQ9DB34 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp2aQ9DB34 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp2aQ9DB34 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp2aQ9DB34 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.52□□□□□ -0.24
Chmp2aQ9DB34 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp2aQ9DB34 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Chmp2aQ9DB34 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp2aQ9DB34 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms