Protein–RNA interactions for Protein: Q9DA21

Smco2, Single-pass membrane and coiled-coil domain-containing protein 2, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco2Q9DA21 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smco2Q9DA21 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smco2Q9DA21 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smco2Q9DA21 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smco2Q9DA21 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smco2Q9DA21 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smco2Q9DA21 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smco2Q9DA21 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.63□□□□□ -0.07
Smco2Q9DA21 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.63□□□□□ -0.07
Smco2Q9DA21 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smco2Q9DA21 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.63□□□□□ -0.07
Smco2Q9DA21 Gm43179-201ENSMUST00000198797 275 ntBASIC14.63□□□□□ -0.07
Smco2Q9DA21 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smco2Q9DA21 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smco2Q9DA21 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smco2Q9DA21 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smco2Q9DA21 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smco2Q9DA21 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smco2Q9DA21 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smco2Q9DA21 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Smco2Q9DA21 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smco2Q9DA21 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smco2Q9DA21 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smco2Q9DA21 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smco2Q9DA21 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smco2Q9DA21 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smco2Q9DA21 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smco2Q9DA21 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smco2Q9DA21 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smco2Q9DA21 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.62□□□□□ -0.07
Smco2Q9DA21 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smco2Q9DA21 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smco2Q9DA21 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smco2Q9DA21 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smco2Q9DA21 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Smco2Q9DA21 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smco2Q9DA21 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smco2Q9DA21 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.62□□□□□ -0.07
Smco2Q9DA21 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.62□□□□□ -0.07
Smco2Q9DA21 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smco2Q9DA21 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smco2Q9DA21 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smco2Q9DA21 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.62□□□□□ -0.07
Smco2Q9DA21 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.62□□□□□ -0.07
Smco2Q9DA21 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smco2Q9DA21 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.62□□□□□ -0.07
Smco2Q9DA21 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smco2Q9DA21 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.62□□□□□ -0.07
Smco2Q9DA21 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smco2Q9DA21 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smco2Q9DA21 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smco2Q9DA21 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smco2Q9DA21 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smco2Q9DA21 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Smco2Q9DA21 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smco2Q9DA21 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smco2Q9DA21 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smco2Q9DA21 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smco2Q9DA21 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smco2Q9DA21 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.61□□□□□ -0.07
Smco2Q9DA21 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.61□□□□□ -0.07
Smco2Q9DA21 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smco2Q9DA21 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smco2Q9DA21 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smco2Q9DA21 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smco2Q9DA21 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.61□□□□□ -0.07
Smco2Q9DA21 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smco2Q9DA21 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smco2Q9DA21 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smco2Q9DA21 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smco2Q9DA21 Gm11637-201ENSMUST00000120601 592 ntBASIC14.61□□□□□ -0.07
Smco2Q9DA21 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smco2Q9DA21 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.61□□□□□ -0.07
Smco2Q9DA21 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smco2Q9DA21 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.61□□□□□ -0.07
Smco2Q9DA21 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smco2Q9DA21 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smco2Q9DA21 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smco2Q9DA21 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smco2Q9DA21 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smco2Q9DA21 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smco2Q9DA21 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smco2Q9DA21 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.61□□□□□ -0.07
Smco2Q9DA21 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Smco2Q9DA21 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Smco2Q9DA21 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smco2Q9DA21 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smco2Q9DA21 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smco2Q9DA21 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smco2Q9DA21 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Smco2Q9DA21 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smco2Q9DA21 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smco2Q9DA21 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smco2Q9DA21 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smco2Q9DA21 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smco2Q9DA21 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.6□□□□□ -0.07
Smco2Q9DA21 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.6□□□□□ -0.07
Smco2Q9DA21 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smco2Q9DA21 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smco2Q9DA21 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms