Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Gm12384-201ENSMUST00000119228 919 ntBASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Gm37042-201ENSMUST00000193816 581 ntBASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Gm25857-201ENSMUST00000082788 129 ntBASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.38□□□□□ -0.59
Tmem54Q9D7S1 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Gm14660-201ENSMUST00000119809 575 ntBASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Mir1982-201ENSMUST00000157368 74 ntBASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Gm17208-201ENSMUST00000168388 535 ntBASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem54Q9D7S1 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem54Q9D7S1 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms