Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12□□□□□ -0.49
Trim13Q9CYB0 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12□□□□□ -0.49
Trim13Q9CYB0 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12□□□□□ -0.49
Trim13Q9CYB0 Gm37015-201ENSMUST00000192763 1521 ntBASIC12□□□□□ -0.49
Trim13Q9CYB0 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trim13Q9CYB0 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trim13Q9CYB0 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trim13Q9CYB0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim13Q9CYB0 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Gm13616-201ENSMUST00000120600 222 ntBASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Matn2-203ENSMUST00000226766 3252 ntBASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim13Q9CYB0 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Gm15920-201ENSMUST00000118998 402 ntBASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Gm19931-201ENSMUST00000198920 368 ntBASIC11.98□□□□□ -0.49
Trim13Q9CYB0 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 AC124732.2-201ENSMUST00000221977 316 ntBASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim13Q9CYB0 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.98□□□□□ -0.49
Trim13Q9CYB0 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms