Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Smc3Q9CW03 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC15.25■□□□□ 0.03
Smc3Q9CW03 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.25■□□□□ 0.03
Smc3Q9CW03 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc3Q9CW03 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Smc3Q9CW03 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smc3Q9CW03 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc3Q9CW03 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc3Q9CW03 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc3Q9CW03 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC15.25■□□□□ 0.03
Smc3Q9CW03 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Smc3Q9CW03 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.25■□□□□ 0.03
Smc3Q9CW03 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc3Q9CW03 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc3Q9CW03 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc3Q9CW03 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc3Q9CW03 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc3Q9CW03 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.24■□□□□ 0.03
Smc3Q9CW03 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smc3Q9CW03 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smc3Q9CW03 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc3Q9CW03 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Smc3Q9CW03 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc3Q9CW03 Mbnl2-204ENSMUST00000227012 2390 ntBASIC15.24■□□□□ 0.03
Smc3Q9CW03 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Smc3Q9CW03 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Smc3Q9CW03 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc3Q9CW03 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.24■□□□□ 0.03
Smc3Q9CW03 Gm14057-201ENSMUST00000120631 482 ntBASIC15.24■□□□□ 0.03
Smc3Q9CW03 Gm44855-201ENSMUST00000205725 362 ntBASIC15.24■□□□□ 0.03
Smc3Q9CW03 Gm18307-201ENSMUST00000206864 949 ntBASIC15.24■□□□□ 0.03
Smc3Q9CW03 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc3Q9CW03 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.24■□□□□ 0.03
Smc3Q9CW03 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc3Q9CW03 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc3Q9CW03 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc3Q9CW03 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc3Q9CW03 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Smc3Q9CW03 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc3Q9CW03 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc3Q9CW03 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc3Q9CW03 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.24■□□□□ 0.03
Smc3Q9CW03 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc3Q9CW03 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
Smc3Q9CW03 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc3Q9CW03 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc3Q9CW03 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc3Q9CW03 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc3Q9CW03 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc3Q9CW03 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smc3Q9CW03 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smc3Q9CW03 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smc3Q9CW03 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smc3Q9CW03 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Smc3Q9CW03 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc3Q9CW03 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc3Q9CW03 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc3Q9CW03 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.23■□□□□ 0.03
Smc3Q9CW03 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Smc3Q9CW03 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smc3Q9CW03 Gm7558-201ENSMUST00000193221 1165 ntBASIC15.23■□□□□ 0.03
Smc3Q9CW03 Gm6983-201ENSMUST00000214912 628 ntBASIC15.23■□□□□ 0.03
Smc3Q9CW03 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.23■□□□□ 0.03
Smc3Q9CW03 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC15.23■□□□□ 0.03
Smc3Q9CW03 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc3Q9CW03 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc3Q9CW03 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc3Q9CW03 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc3Q9CW03 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smc3Q9CW03 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Smc3Q9CW03 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc3Q9CW03 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc3Q9CW03 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc3Q9CW03 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc3Q9CW03 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smc3Q9CW03 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc3Q9CW03 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc3Q9CW03 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Smc3Q9CW03 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc3Q9CW03 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC15.22■□□□□ 0.03
Smc3Q9CW03 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc3Q9CW03 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc3Q9CW03 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Smc3Q9CW03 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Smc3Q9CW03 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC15.22■□□□□ 0.03
Smc3Q9CW03 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Smc3Q9CW03 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc3Q9CW03 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Smc3Q9CW03 Gm11978-201ENSMUST00000122315 466 ntBASIC15.22■□□□□ 0.03
Smc3Q9CW03 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.22■□□□□ 0.03
Smc3Q9CW03 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Smc3Q9CW03 Gm28631-201ENSMUST00000190740 334 ntBASIC15.22■□□□□ 0.03
Smc3Q9CW03 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.22■□□□□ 0.03
Smc3Q9CW03 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Smc3Q9CW03 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smc3Q9CW03 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC15.22■□□□□ 0.03
Smc3Q9CW03 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc3Q9CW03 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smc3Q9CW03 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc3Q9CW03 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms