Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud1Q9CUB6 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Gm11591-201ENSMUST00000120063 702 ntBASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.31□□□□□ -0.44
Otud1Q9CUB6 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Gm17208-201ENSMUST00000168388 535 ntBASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Gm38002-201ENSMUST00000193255 180 ntBASIC12.31□□□□□ -0.44
Otud1Q9CUB6 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud1Q9CUB6 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.3□□□□□ -0.44
Otud1Q9CUB6 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Otud1Q9CUB6 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Otud1Q9CUB6 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Otud1Q9CUB6 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Otud1Q9CUB6 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
Otud1Q9CUB6 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Otud1Q9CUB6 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Otud1Q9CUB6 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Otud1Q9CUB6 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Otud1Q9CUB6 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Otud1Q9CUB6 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Otud1Q9CUB6 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Otud1Q9CUB6 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Otud1Q9CUB6 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Otud1Q9CUB6 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Otud1Q9CUB6 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Otud1Q9CUB6 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Otud1Q9CUB6 Gm11637-201ENSMUST00000120601 592 ntBASIC12.3□□□□□ -0.44
Otud1Q9CUB6 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.3□□□□□ -0.44
Otud1Q9CUB6 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.3□□□□□ -0.44
Otud1Q9CUB6 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.3□□□□□ -0.44
Otud1Q9CUB6 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Otud1Q9CUB6 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Otud1Q9CUB6 Gm18351-201ENSMUST00000188646 883 ntBASIC12.3□□□□□ -0.44
Otud1Q9CUB6 Gm37042-201ENSMUST00000193816 581 ntBASIC12.3□□□□□ -0.44
Otud1Q9CUB6 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.3□□□□□ -0.44
Otud1Q9CUB6 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.3□□□□□ -0.44
Otud1Q9CUB6 Gm19309-201ENSMUST00000218295 205 ntBASIC12.3□□□□□ -0.44
Otud1Q9CUB6 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.3□□□□□ -0.44
Otud1Q9CUB6 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Otud1Q9CUB6 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms