Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.72
RTRAFQ9CQE8 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
RTRAFQ9CQE8 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
RTRAFQ9CQE8 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
RTRAFQ9CQE8 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.72
RTRAFQ9CQE8 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.52□□□□□ -0.72
RTRAFQ9CQE8 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
RTRAFQ9CQE8 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
RTRAFQ9CQE8 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 AC166341.4-201ENSMUST00000220625 123 ntBASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Gpr146-202ENSMUST00000053120 1040 ntBASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTRAFQ9CQE8 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Gm17271-201ENSMUST00000165535 355 ntBASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 AC138767.1-201ENSMUST00000222661 415 ntBASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTRAFQ9CQE8 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms