Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Krt88Q9CPR6 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Krt88Q9CPR6 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Krt88Q9CPR6 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Krt88Q9CPR6 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Krt88Q9CPR6 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Krt88Q9CPR6 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.71□□□□□ -0.53
Krt88Q9CPR6 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.71□□□□□ -0.53
Krt88Q9CPR6 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Krt88Q9CPR6 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Krt88Q9CPR6 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Krt88Q9CPR6 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC11.71□□□□□ -0.53
Krt88Q9CPR6 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.53
Krt88Q9CPR6 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Krt88Q9CPR6 Gm7774-201ENSMUST00000200064 533 ntBASIC11.71□□□□□ -0.53
Krt88Q9CPR6 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Krt88Q9CPR6 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Krt88Q9CPR6 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.71□□□□□ -0.53
Krt88Q9CPR6 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Krt88Q9CPR6 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Krt88Q9CPR6 Gm24447-201ENSMUST00000083977 338 ntBASIC11.71□□□□□ -0.53
Krt88Q9CPR6 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Krt88Q9CPR6 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.71□□□□□ -0.53
Krt88Q9CPR6 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Krt88Q9CPR6 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.71□□□□□ -0.54
Krt88Q9CPR6 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Krt88Q9CPR6 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Krt88Q9CPR6 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Krt88Q9CPR6 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Krt88Q9CPR6 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Krt88Q9CPR6 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Krt88Q9CPR6 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Krt88Q9CPR6 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Krt88Q9CPR6 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.71□□□□□ -0.54
Krt88Q9CPR6 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Gm15693-201ENSMUST00000120470 637 ntBASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.7□□□□□ -0.54
Krt88Q9CPR6 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Krt88Q9CPR6 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Krt88Q9CPR6 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Krt88Q9CPR6 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Krt88Q9CPR6 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Krt88Q9CPR6 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Krt88Q9CPR6 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Krt88Q9CPR6 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Krt88Q9CPR6 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Krt88Q9CPR6 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.69□□□□□ -0.54
Krt88Q9CPR6 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Krt88Q9CPR6 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.69□□□□□ -0.54
Krt88Q9CPR6 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Krt88Q9CPR6 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Krt88Q9CPR6 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.69□□□□□ -0.54
Krt88Q9CPR6 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Krt88Q9CPR6 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Krt88Q9CPR6 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.69□□□□□ -0.54
Krt88Q9CPR6 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.69□□□□□ -0.54
Krt88Q9CPR6 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC11.69□□□□□ -0.54
Krt88Q9CPR6 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Krt88Q9CPR6 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Krt88Q9CPR6 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Krt88Q9CPR6 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms