Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 AC154184.3-201ENSMUST00000225620 1090 ntBASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Gm11836-201ENSMUST00000121022 441 ntBASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Gm13263-201ENSMUST00000121271 838 ntBASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Gm44270-201ENSMUST00000203084 1234 ntBASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh15Q99PJ1 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Gm22920-201ENSMUST00000102175 109 ntBASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Gm15352-201ENSMUST00000118696 270 ntBASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Gm6430-201ENSMUST00000054664 1248 ntBASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh15Q99PJ1 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh15Q99PJ1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh15Q99PJ1 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh15Q99PJ1 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh15Q99PJ1 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Pcdh15Q99PJ1 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Pcdh15Q99PJ1 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC14.27□□□□□ -0.12
Pcdh15Q99PJ1 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC14.27□□□□□ -0.12
Pcdh15Q99PJ1 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Pcdh15Q99PJ1 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC14.27□□□□□ -0.12
Pcdh15Q99PJ1 Gm2875-201ENSMUST00000211333 360 ntBASIC14.27□□□□□ -0.12
Pcdh15Q99PJ1 AC165260.2-203ENSMUST00000224237 336 ntBASIC14.27□□□□□ -0.12
Pcdh15Q99PJ1 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh15Q99PJ1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh15Q99PJ1 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh15Q99PJ1 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh15Q99PJ1 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh15Q99PJ1 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh15Q99PJ1 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh15Q99PJ1 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms