Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vmp1Q99KU0 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Gm15806-201ENSMUST00000120696 955 ntBASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Gm9002-201ENSMUST00000178437 499 ntBASIC12.55□□□□□ -0.4
Vmp1Q99KU0 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vmp1Q99KU0 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Gm42550-201ENSMUST00000201553 960 ntBASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Gm6983-201ENSMUST00000214912 628 ntBASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Gm5186-201ENSMUST00000218781 920 ntBASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC12.54□□□□□ -0.4
Vmp1Q99KU0 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vmp1Q99KU0 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vmp1Q99KU0 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms