Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm22065-201ENSMUST00000103753 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm22066-201ENSMUST00000103761 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm24932-201ENSMUST00000103763 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm24115-201ENSMUST00000103799 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm22190-201ENSMUST00000103827 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm22191-201ENSMUST00000103831 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm24721-201ENSMUST00000103849 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm28018-201ENSMUST00000103869 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm26399-201ENSMUST00000103937 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm24158-201ENSMUST00000175263 71 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm25349-201ENSMUST00000177728 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm23616-201ENSMUST00000177797 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm25871-201ENSMUST00000177816 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm24752-201ENSMUST00000178240 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm24496-201ENSMUST00000178287 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm25649-201ENSMUST00000178476 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm25548-201ENSMUST00000178681 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm23147-201ENSMUST00000178841 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm26095-201ENSMUST00000179270 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm22171-201ENSMUST00000179283 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm23936-201ENSMUST00000179354 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm22619-201ENSMUST00000179516 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm25255-201ENSMUST00000179579 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm24755-201ENSMUST00000179691 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm26506-201ENSMUST00000179692 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm25086-201ENSMUST00000179931 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm23243-201ENSMUST00000180047 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm24659-201ENSMUST00000180212 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm24169-201ENSMUST00000180244 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm23689-201ENSMUST00000180354 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm27359-201ENSMUST00000184153 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm27785-201ENSMUST00000184268 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm27466-201ENSMUST00000184396 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm27703-201ENSMUST00000184836 110 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm5312-201ENSMUST00000203728 547 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm17330-201ENSMUST00000221047 165 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.1□□□□□ -0.31
Rpa1Q8VEE4 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Gm46209-201ENSMUST00000217912 553 ntBASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Gm5867-201ENSMUST00000063197 592 ntBASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Rpa1Q8VEE4 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms