Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.08□□□□□ -0.32
Clip4Q8CI96 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.08□□□□□ -0.32
Clip4Q8CI96 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clip4Q8CI96 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clip4Q8CI96 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clip4Q8CI96 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clip4Q8CI96 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.08□□□□□ -0.32
Clip4Q8CI96 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.08□□□□□ -0.32
Clip4Q8CI96 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.08□□□□□ -0.32
Clip4Q8CI96 Gm43433-201ENSMUST00000196573 481 ntBASIC13.08□□□□□ -0.32
Clip4Q8CI96 Gm7287-201ENSMUST00000205267 602 ntBASIC13.08□□□□□ -0.32
Clip4Q8CI96 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.08□□□□□ -0.32
Clip4Q8CI96 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.08□□□□□ -0.32
Clip4Q8CI96 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clip4Q8CI96 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clip4Q8CI96 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clip4Q8CI96 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clip4Q8CI96 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.08□□□□□ -0.32
Clip4Q8CI96 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.08□□□□□ -0.32
Clip4Q8CI96 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clip4Q8CI96 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clip4Q8CI96 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clip4Q8CI96 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clip4Q8CI96 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Clip4Q8CI96 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clip4Q8CI96 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Clip4Q8CI96 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clip4Q8CI96 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.07□□□□□ -0.32
Clip4Q8CI96 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.07□□□□□ -0.32
Clip4Q8CI96 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clip4Q8CI96 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clip4Q8CI96 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clip4Q8CI96 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Clip4Q8CI96 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Clip4Q8CI96 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clip4Q8CI96 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clip4Q8CI96 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Clip4Q8CI96 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.07□□□□□ -0.32
Clip4Q8CI96 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.07□□□□□ -0.32
Clip4Q8CI96 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.07□□□□□ -0.32
Clip4Q8CI96 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.07□□□□□ -0.32
Clip4Q8CI96 Gm12403-201ENSMUST00000121384 959 ntBASIC13.07□□□□□ -0.32
Clip4Q8CI96 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.07□□□□□ -0.32
Clip4Q8CI96 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.07□□□□□ -0.32
Clip4Q8CI96 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.07□□□□□ -0.32
Clip4Q8CI96 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.07□□□□□ -0.32
Clip4Q8CI96 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Clip4Q8CI96 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Clip4Q8CI96 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.07□□□□□ -0.32
Clip4Q8CI96 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.07□□□□□ -0.32
Clip4Q8CI96 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clip4Q8CI96 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.07□□□□□ -0.32
Clip4Q8CI96 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clip4Q8CI96 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Clip4Q8CI96 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Clip4Q8CI96 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clip4Q8CI96 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
Clip4Q8CI96 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clip4Q8CI96 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Clip4Q8CI96 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Clip4Q8CI96 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Gm17150-201ENSMUST00000165577 381 ntBASIC13.06□□□□□ -0.32
Clip4Q8CI96 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Clip4Q8CI96 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.06□□□□□ -0.32
Clip4Q8CI96 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.06□□□□□ -0.32
Clip4Q8CI96 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Clip4Q8CI96 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.06□□□□□ -0.32
Clip4Q8CI96 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clip4Q8CI96 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms