Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Nup88Q8CEC0 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Gm12384-201ENSMUST00000119228 919 ntBASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Gm20633-201ENSMUST00000176742 2831 ntBASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Gm7553-201ENSMUST00000185805 1426 ntBASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Gm38319-201ENSMUST00000194537 1266 ntBASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Gm42550-201ENSMUST00000201553 960 ntBASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nup88Q8CEC0 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup88Q8CEC0 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Gm5687-201ENSMUST00000118252 640 ntBASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Gm11803-201ENSMUST00000119966 444 ntBASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Gm8598-201ENSMUST00000221184 836 ntBASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 AC155298.2-201ENSMUST00000225485 6226 ntBASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nup88Q8CEC0 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Nup88Q8CEC0 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms