Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ptcd1Q8C2E4 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC15.97■□□□□ 0.15
Ptcd1Q8C2E4 Gm11531-201ENSMUST00000117614 555 ntBASIC15.97■□□□□ 0.15
Ptcd1Q8C2E4 Gm14716-201ENSMUST00000120138 718 ntBASIC15.97■□□□□ 0.15
Ptcd1Q8C2E4 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ptcd1Q8C2E4 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ptcd1Q8C2E4 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC15.97■□□□□ 0.15
Ptcd1Q8C2E4 Gm8099-201ENSMUST00000200510 742 ntBASIC15.97■□□□□ 0.15
Ptcd1Q8C2E4 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC15.97■□□□□ 0.15
Ptcd1Q8C2E4 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ptcd1Q8C2E4 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ptcd1Q8C2E4 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ptcd1Q8C2E4 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Ptcd1Q8C2E4 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ptcd1Q8C2E4 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Ptcd1Q8C2E4 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ptcd1Q8C2E4 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ptcd1Q8C2E4 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ptcd1Q8C2E4 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ptcd1Q8C2E4 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ptcd1Q8C2E4 Gm19221-201ENSMUST00000221827 1477 ntBASIC15.97■□□□□ 0.15
Ptcd1Q8C2E4 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ptcd1Q8C2E4 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ptcd1Q8C2E4 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ptcd1Q8C2E4 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ptcd1Q8C2E4 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ptcd1Q8C2E4 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Ptcd1Q8C2E4 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ptcd1Q8C2E4 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ptcd1Q8C2E4 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ptcd1Q8C2E4 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Ptcd1Q8C2E4 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ptcd1Q8C2E4 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ptcd1Q8C2E4 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ptcd1Q8C2E4 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ptcd1Q8C2E4 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC15.96■□□□□ 0.15
Ptcd1Q8C2E4 Gm14208-201ENSMUST00000119645 678 ntBASIC15.96■□□□□ 0.15
Ptcd1Q8C2E4 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Ptcd1Q8C2E4 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Ptcd1Q8C2E4 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Ptcd1Q8C2E4 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ptcd1Q8C2E4 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ptcd1Q8C2E4 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ptcd1Q8C2E4 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ptcd1Q8C2E4 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ptcd1Q8C2E4 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ptcd1Q8C2E4 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ptcd1Q8C2E4 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ptcd1Q8C2E4 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ptcd1Q8C2E4 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Crry-ps-201ENSMUST00000079090 1309 ntBASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 AC167669.2-201ENSMUST00000224417 1620 ntBASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Gm11930-201ENSMUST00000117788 190 ntBASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Gm9083-201ENSMUST00000120423 819 ntBASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Gm13665-201ENSMUST00000120830 528 ntBASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Gm28450-201ENSMUST00000187349 638 ntBASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Gm5950-201ENSMUST00000213337 772 ntBASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 CT009738.1-201ENSMUST00000219031 809 ntBASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptcd1Q8C2E4 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC15.94■□□□□ 0.14
Ptcd1Q8C2E4 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ptcd1Q8C2E4 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ptcd1Q8C2E4 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ptcd1Q8C2E4 Gm37437-201ENSMUST00000194451 1937 ntBASIC15.94■□□□□ 0.14
Ptcd1Q8C2E4 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms