Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Gm15711-201ENSMUST00000118889 535 ntBASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Gm27627-201ENSMUST00000183644 150 ntBASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Lgi3-203ENSMUST00000226548 1001 ntBASIC10.08□□□□□ -0.8
Chd9Q8BYH8 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Gm9387-201ENSMUST00000098624 1320 ntBASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Chd9Q8BYH8 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Gm13700-201ENSMUST00000118624 1128 ntBASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Gm12990-201ENSMUST00000120372 468 ntBASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Gm26875-201ENSMUST00000181006 950 ntBASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Gm26989-201ENSMUST00000182608 749 ntBASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Gm2445-201ENSMUST00000182798 989 ntBASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Gm8756-201ENSMUST00000183250 929 ntBASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Gm42872-201ENSMUST00000200026 1967 ntBASIC10.07□□□□□ -0.8
Chd9Q8BYH8 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Gm14058-201ENSMUST00000116082 735 ntBASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Gm11422-201ENSMUST00000118925 1103 ntBASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Gm1848-201ENSMUST00000120711 789 ntBASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Gm12516-201ENSMUST00000120819 385 ntBASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Gm10774-201ENSMUST00000188689 204 ntBASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Gm9916-201ENSMUST00000192943 1228 ntBASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
Chd9Q8BYH8 Gm42928-201ENSMUST00000197338 3339 ntBASIC10.06□□□□□ -0.8
Chd9Q8BYH8 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms