Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nup54Q8BTS4 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup54Q8BTS4 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nup54Q8BTS4 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup54Q8BTS4 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nup54Q8BTS4 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup54Q8BTS4 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup54Q8BTS4 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nup54Q8BTS4 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup54Q8BTS4 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nup54Q8BTS4 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 Gm17420-201ENSMUST00000164753 153 ntBASIC13.27□□□□□ -0.29
Nup54Q8BTS4 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.27□□□□□ -0.29
Nup54Q8BTS4 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.27□□□□□ -0.29
Nup54Q8BTS4 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.27□□□□□ -0.29
Nup54Q8BTS4 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.27□□□□□ -0.29
Nup54Q8BTS4 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup54Q8BTS4 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup54Q8BTS4 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup54Q8BTS4 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup54Q8BTS4 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup54Q8BTS4 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup54Q8BTS4 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup54Q8BTS4 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup54Q8BTS4 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.26□□□□□ -0.29
Nup54Q8BTS4 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup54Q8BTS4 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup54Q8BTS4 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nup54Q8BTS4 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nup54Q8BTS4 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.26□□□□□ -0.29
Nup54Q8BTS4 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nup54Q8BTS4 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.26□□□□□ -0.29
Nup54Q8BTS4 Gm7809-201ENSMUST00000153199 742 ntBASIC13.26□□□□□ -0.29
Nup54Q8BTS4 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.26□□□□□ -0.29
Nup54Q8BTS4 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.26□□□□□ -0.29
Nup54Q8BTS4 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nup54Q8BTS4 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup54Q8BTS4 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.26□□□□□ -0.29
Nup54Q8BTS4 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup54Q8BTS4 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup54Q8BTS4 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup54Q8BTS4 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup54Q8BTS4 Gm10478-201ENSMUST00000084451 396 ntBASIC13.26□□□□□ -0.29
Nup54Q8BTS4 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Nup54Q8BTS4 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup54Q8BTS4 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup54Q8BTS4 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup54Q8BTS4 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nup54Q8BTS4 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.25□□□□□ -0.29
Nup54Q8BTS4 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.25□□□□□ -0.29
Nup54Q8BTS4 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup54Q8BTS4 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup54Q8BTS4 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup54Q8BTS4 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.25□□□□□ -0.29
Nup54Q8BTS4 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup54Q8BTS4 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.25□□□□□ -0.29
Nup54Q8BTS4 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup54Q8BTS4 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms